Detailed information NTG0517515

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: I9190_RS11490
• Genome accession: NZ_CP066121
• Coordinates: 2463002..2463655 (-)
• Length: 217 a.a.
• NCBI ID: WP_005029252.1
• Uniprot ID: N9F8A0
• Organism: Acinetobacter bereziniae strain GD0320
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2458002..2468655

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I9190_RS11460 (I9190_11460)	-	2458258..2458692 (-)	435	WP_004830980.1	SRPBCC family protein	-
I9190_RS11465 (I9190_11465)	tadA	2458779..2459303 (-)	525	WP_009586640.1	tRNA adenosine(34) deaminase TadA	-
I9190_RS11470 (I9190_11470)	-	2459310..2460431 (-)	1122	WP_004830982.1	enoyl-CoA hydratase/isomerase family protein	-
I9190_RS11475 (I9190_11475)	ung	2460428..2461141 (-)	714	WP_004830983.1	uracil-DNA glycosylase	-
I9190_RS11480 (I9190_11480)	-	2461216..2461812 (-)	597	WP_005029250.1	6-pyruvoyl trahydropterin synthase family protein	-
I9190_RS11485 (I9190_11485)	gspK	2462038..2463009 (-)	972	WP_004830985.1	type II secretion system minor pseudopilin GspK	-
I9190_RS11490 (I9190_11490)	xcpW	2463002..2463655 (-)	654	WP_005029252.1	type II secretion system minor pseudopilin GspJ	Machinery gene
I9190_RS11495 (I9190_11495)	xcpV	2463658..2464041 (-)	384	WP_009586653.1	type II secretion system minor pseudopilin GspI	Machinery gene
I9190_RS11500 (I9190_11500)	-	2464028..2464594 (-)	567	WP_009586651.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
I9190_RS11505 (I9190_11505)	-	2464600..2465214 (-)	615	WP_004830990.1	TetR/AcrR family transcriptional regulator	-
I9190_RS11510 (I9190_11510)	-	2465299..2466072 (-)	774	WP_049044701.1	TatD family hydrolase	-
I9190_RS11515 (I9190_11515)	-	2466100..2466441 (-)	342	WP_004830992.1	PilZ domain-containing protein	-
I9190_RS11520 (I9190_11520)	-	2466468..2467448 (-)	981	WP_151780769.1	DNA polymerase III subunit delta'	-
I9190_RS11525 (I9190_11525)	kdsB	2467486..2468247 (-)	762	WP_121775060.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 217 a.a.
• Molecular weight: 25078.60 Da
• Isoelectric Point: 8.2714

>NTDB_id=517515 I9190_RS11490 WP_005029252.1 2463002..2463655(-) (xcpW) [Acinetobacter bereziniae strain GD0320]
MNVVQNKNNNTVKMQKRSGFTLIELLVAIAIFAVLSALGWKIFDYLIKVKDRNVMHEENLGQLQGAYQQIQRDTLQIVPI
SARSGEQVEPALRLDRQKLSFSKAGVTDPLKQGLSPYERIEYGYDQQEKKLYRLKYSNLNRNSSEQPLSSVMLTDVDAYQ
IEILNPNESDRWPNDLTKNDSQLPRGIKMKITIHEVEYEWIFSLLNTDFLIKNNQNG

Nucleotide

• Length: 654 bp

>NTDB_id=517515 I9190_RS11490 WP_005029252.1 2463002..2463655(-) (xcpW) [Acinetobacter bereziniae strain GD0320]
ATGAACGTCGTCCAAAATAAAAACAATAATACTGTCAAAATGCAGAAGAGATCAGGTTTTACTTTGATTGAGTTACTTGT
CGCAATTGCTATTTTTGCGGTGCTTTCTGCCTTGGGTTGGAAGATATTTGATTATTTGATTAAGGTCAAAGATCGTAATG
TGATGCACGAAGAGAATTTAGGGCAACTCCAAGGTGCATATCAACAAATTCAGCGTGATACATTGCAAATCGTGCCAATT
TCAGCCCGAAGTGGTGAACAAGTTGAACCTGCATTGCGCTTAGATCGACAAAAACTATCATTTAGTAAAGCTGGTGTTAC
AGATCCTTTAAAGCAAGGTCTCTCACCTTATGAGCGAATAGAATACGGTTATGACCAGCAAGAGAAGAAACTATATCGAT
TAAAGTATTCCAATCTGAATAGAAATAGCTCGGAACAACCATTGTCGAGTGTCATGCTGACGGATGTAGATGCCTATCAA
ATTGAAATACTCAATCCAAATGAGTCAGATCGTTGGCCAAATGACTTAACTAAAAATGATAGCCAATTACCGCGTGGAAT
TAAAATGAAAATCACGATTCATGAAGTAGAATATGAGTGGATTTTTAGTTTATTGAATACTGATTTTTTGATAAAGAATA
ATCAAAATGGATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (70-201)

• Prokaryotic N-terminal methylation motif (N_methyl) (14-38)

3D structure

• AlphaFold DB: N9F8A0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	59.813	98.618	0.59