Detailed information NTG0517197

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: I6H73_RS09135
• Genome accession: NZ_CP066073
• Coordinates: 1835583..1836515 (-)
• Length: 310 a.a.
• NCBI ID: WP_003060110.1
• Uniprot ID: A0A9X8T5Q4
• Organism: Streptococcus dysgalactiae strain FDAARGOS_1016
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1830583..1841515

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H73_RS09110 (I6H73_09110)	tsaD	1831073..1832089 (-)	1017	WP_003056674.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
I6H73_RS09115 (I6H73_09115)	rimI	1832079..1832504 (-)	426	WP_003056684.1	ribosomal protein S18-alanine N-acetyltransferase	-
I6H73_RS09120 (I6H73_09120)	tsaB	1832506..1833204 (-)	699	WP_003062223.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
I6H73_RS09125 (I6H73_09125)	-	1833490..1833720 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
I6H73_RS09130 (I6H73_09130)	rnjA	1833722..1835404 (+)	1683	WP_003056700.1	ribonuclease J1	-
I6H73_RS09135 (I6H73_09135)	amiF	1835583..1836515 (-)	933	WP_003060110.1	ATP-binding cassette domain-containing protein	Regulator
I6H73_RS09140 (I6H73_09140)	oppD	1836508..1837560 (-)	1053	WP_003058019.1	ABC transporter ATP-binding protein	Regulator
I6H73_RS09145 (I6H73_09145)	-	1837572..1838603 (-)	1032	WP_003058013.1	ABC transporter permease	-
I6H73_RS09150 (I6H73_09150)	-	1838613..1839527 (-)	915	WP_003052794.1	ABC transporter permease	-
I6H73_RS09155 (I6H73_09155)	-	1839795..1841450 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35203.02 Da
• Isoelectric Point: 6.6437

>NTDB_id=517197 I6H73_RS09135 WP_003060110.1 1835583..1836515(-) (amiF) [Streptococcus dysgalactiae strain FDAARGOS_1016]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYH

Nucleotide

• Length: 933 bp

>NTDB_id=517197 I6H73_RS09135 WP_003060110.1 1835583..1836515(-) (amiF) [Streptococcus dysgalactiae strain FDAARGOS_1016]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCCGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTCACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAACAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTGTC
GATTCAGGCCCAGGTAGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAACCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTATATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACGCCAGGCCATT
TTGTCTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526