Detailed information NTG0517092

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: I6H74_RS03075
• Genome accession: NZ_CP066069
• Coordinates: 601236..602168 (+)
• Length: 310 a.a.
• NCBI ID: WP_003060110.1
• Uniprot ID: A0A9X8T5Q4
• Organism: Streptococcus dysgalactiae strain FDAARGOS_1017
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 596236..607168

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H74_RS03055 (I6H74_03050)	-	596301..597956 (+)	1656	WP_115257017.1	peptide ABC transporter substrate-binding protein	-
I6H74_RS03060 (I6H74_03055)	-	598224..599138 (+)	915	WP_003052794.1	ABC transporter permease	-
I6H74_RS03065 (I6H74_03060)	-	599148..600179 (+)	1032	WP_046177231.1	ABC transporter permease	-
I6H74_RS03070 (I6H74_03065)	oppD	600191..601243 (+)	1053	WP_012767556.1	ABC transporter ATP-binding protein	Regulator
I6H74_RS03075 (I6H74_03070)	amiF	601236..602168 (+)	933	WP_003060110.1	ATP-binding cassette domain-containing protein	Regulator
I6H74_RS03080 (I6H74_03075)	rnjA	602347..604029 (-)	1683	WP_003056700.1	ribonuclease J1	-
I6H74_RS03085 (I6H74_03080)	-	604031..604261 (-)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
I6H74_RS03090 (I6H74_03085)	tsaB	604547..605245 (+)	699	WP_046177230.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
I6H74_RS03095 (I6H74_03090)	rimI	605247..605672 (+)	426	WP_003056684.1	ribosomal protein S18-alanine N-acetyltransferase	-
I6H74_RS03100 (I6H74_03095)	tsaD	605662..606678 (+)	1017	WP_115257016.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35203.02 Da
• Isoelectric Point: 6.6437

>NTDB_id=517092 I6H74_RS03075 WP_003060110.1 601236..602168(+) (amiF) [Streptococcus dysgalactiae strain FDAARGOS_1017]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYH

Nucleotide

• Length: 933 bp

>NTDB_id=517092 I6H74_RS03075 WP_003060110.1 601236..602168(+) (amiF) [Streptococcus dysgalactiae strain FDAARGOS_1017]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCCGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTCACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAACAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTGTC
GATTCAGGCCCAGGTAGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACTTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAACCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTATATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACGCCAGGCCATT
TTGTCTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526