Detailed information NTG0517006

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: I6I28_RS00720
• Genome accession: NZ_CP066062
• Coordinates: 137188..139650 (-)
• Length: 820 a.a.
• NCBI ID: WP_049405567.1
• Uniprot ID: -
• Organism: Staphylococcus pettenkoferi strain FDAARGOS_1071
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 132188..144650

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6I28_RS00700 (I6I28_00700)	-	133138..133449 (-)	312	WP_002471066.1	DUF1292 domain-containing protein	-
I6I28_RS00705 (I6I28_00705)	ruvX	133465..133893 (-)	429	WP_103370449.1	Holliday junction resolvase RuvX	-
I6I28_RS00710 (I6I28_00710)	-	133896..134159 (-)	264	WP_002471049.1	IreB family regulatory phosphoprotein	-
I6I28_RS00715 (I6I28_00715)	alaS	134228..136858 (-)	2631	WP_103370450.1	alanine--tRNA ligase	-
I6I28_RS00720 (I6I28_00720)	recD2	137188..139650 (-)	2463	WP_049405567.1	ATP-dependent RecD-like DNA helicase	Machinery gene
I6I28_RS00725 (I6I28_00725)	-	139672..140328 (-)	657	WP_049405564.1	tetratricopeptide repeat protein	-
I6I28_RS00730 (I6I28_00730)	mnmA	140529..141641 (-)	1113	WP_049405562.1	tRNA 2-thiouridine(34) synthase MnmA	-
I6I28_RS00735 (I6I28_00735)	-	141642..142784 (-)	1143	WP_103370451.1	cysteine desulfurase family protein	-
I6I28_RS00740 (I6I28_00740)	-	142992..143990 (+)	999	WP_169931277.1	LLM class flavin-dependent oxidoreductase	-
I6I28_RS00745 (I6I28_00745)	-	144145..144306 (-)	162	WP_002470877.1	hypothetical protein	-
I6I28_RS00750 (I6I28_00750)	-	144334..144516 (-)	183	WP_002470875.1	CsbD family protein	-

Sequence

Protein

• Length: 820 a.a.
• Molecular weight: 92614.71 Da
• Isoelectric Point: 4.4244

>NTDB_id=517006 I6I28_RS00720 WP_049405567.1 137188..139650(-) (recD2) [Staphylococcus pettenkoferi strain FDAARGOS_1071]
MADDTLFNYSMLKGTIDAILFQNKDNFYTVLKVETIETNEDLDDLATVVGFFPDIVEGDVYTFKGQVVSHPKYGKQLKAD
TFEKELPQTKEAIVSYLSSELFKGVGKKTAQNIVNTLGETAITDILDDASVLDKVSGLSKKKRKQIAEQIQANQETERII
VRLHDLGFGPKLAMTIYQTYLDETLAIIEKEPYRLVYDVKGIGFNKADTLARKMGIAYDDDERLKAGILYVLEESCIKQG
HTYLPKTRVYDEAIDMLTDPQEAEITPDHISKMVQELVEENKMIQQEEELAVPSLYYSELKSSQNLYRNYSYTQKLEHFE
QSDLQMHIGEIEERQGVSYAKSQKEALETAINSKVMLLTGGPGTGKTTVIKGIVELYAEIHDLSLDYDDYQEDDYPIVLA
APTGRASKRLAEATQLEAMTIHRLIGWNQDTQPEDILDNEINASLIIIDEMSMVDTWLFHQFMDAVPLDAQIIFVGDEDQ
LPSVGPGQVFKDLIDSQAIPRVNLTEVYRQQDGSSIIELAHRIKLGQQIDITQKFHDRNFIQCGTEQIPNIVEKVAQSAV
RKGYDMSDIQVLAPMYKGSAGIRRLNAVLQDILNPKSDDKREIAFGDVSFRKGDKVLQLVNRPNDNIFNGDIGVIVGVFW
AKENELDKDIIIVDFEGNEIIFTKQDFLELTHAYCTSIHKSQGSEFPIVIMPMVKQYYRMLQRPILYTGLTRAKQSLVLL
GDPEAFHIGLTTQGQTRLTQLRHIVQSYFNITTETDENESDAPDQASQTATESAAADSTQQEAESFQKDSSSVVLTEETI
YQIDPMINMGQVTPYDFVKQ

Nucleotide

• Length: 2463 bp

>NTDB_id=517006 I6I28_RS00720 WP_049405567.1 137188..139650(-) (recD2) [Staphylococcus pettenkoferi strain FDAARGOS_1071]
ATGGCTGACGATACTTTATTTAACTATTCGATGCTTAAAGGCACGATTGACGCAATCTTATTTCAGAATAAGGACAATTT
CTATACGGTATTGAAAGTGGAAACGATTGAGACGAATGAAGATTTAGATGATCTCGCTACTGTCGTCGGCTTCTTCCCGG
ATATCGTTGAGGGTGATGTTTATACCTTTAAGGGGCAAGTCGTCTCTCATCCCAAGTATGGTAAGCAACTCAAGGCAGAT
ACCTTTGAGAAAGAGTTGCCACAAACGAAAGAAGCCATCGTGAGTTATCTTTCAAGTGAATTGTTTAAAGGTGTAGGTAA
AAAGACCGCACAGAATATCGTTAATACGTTAGGTGAAACAGCTATTACTGATATTCTTGACGATGCTTCAGTCTTAGACA
AGGTTTCAGGCTTATCTAAGAAGAAACGTAAACAAATTGCTGAACAAATTCAAGCTAATCAAGAAACAGAACGTATTATT
GTGCGTTTACATGATTTAGGCTTTGGACCTAAACTTGCTATGACGATTTATCAAACTTACTTAGATGAAACATTAGCAAT
CATAGAGAAAGAACCCTATCGCCTGGTATATGACGTTAAAGGGATTGGTTTTAACAAAGCTGACACACTCGCACGTAAGA
TGGGTATCGCTTATGACGATGATGAGCGTCTCAAAGCAGGAATTCTCTACGTGCTGGAGGAATCTTGTATCAAGCAAGGT
CATACATATTTGCCTAAGACAAGAGTTTATGACGAAGCGATAGATATGTTGACTGATCCTCAAGAGGCCGAAATTACTCC
CGACCACATTAGTAAAATGGTTCAAGAACTCGTAGAAGAAAATAAAATGATTCAACAGGAAGAGGAATTAGCTGTACCGA
GCTTATACTATTCCGAGCTTAAGAGTAGCCAAAACCTTTACCGAAATTACTCTTACACGCAAAAGCTCGAACACTTCGAA
CAATCTGATTTACAAATGCACATTGGTGAAATTGAAGAACGCCAAGGCGTGAGTTATGCGAAATCTCAAAAGGAAGCTCT
AGAAACAGCAATCAATTCTAAAGTGATGCTACTCACTGGTGGTCCAGGGACAGGTAAGACGACAGTTATCAAAGGAATAG
TGGAACTTTATGCAGAGATACATGATCTGTCATTAGACTATGATGACTATCAAGAAGATGATTATCCTATCGTTCTAGCT
GCGCCAACAGGTCGAGCATCGAAACGCCTTGCTGAAGCGACGCAACTTGAAGCGATGACAATTCACCGCTTGATAGGTTG
GAATCAAGATACACAGCCTGAAGACATTCTAGATAATGAGATCAATGCAAGCTTAATCATTATTGATGAAATGTCGATGG
TGGATACATGGTTATTCCATCAGTTTATGGATGCTGTGCCACTCGATGCGCAAATCATCTTCGTAGGTGATGAAGATCAG
CTTCCGTCAGTAGGACCTGGCCAAGTATTTAAAGATCTCATTGATTCTCAAGCAATTCCTCGCGTGAATCTAACAGAGGT
TTACCGTCAACAAGATGGCTCAAGTATCATTGAGTTGGCGCACCGTATCAAATTAGGTCAACAAATCGATATAACGCAGA
AGTTTCATGACCGTAATTTTATCCAATGTGGTACGGAACAAATTCCAAATATCGTTGAGAAAGTCGCGCAAAGTGCTGTA
CGAAAAGGTTATGATATGAGCGACATTCAAGTGCTCGCACCGATGTATAAAGGCTCAGCAGGAATTCGTAGATTAAATGC
TGTGCTACAAGATATTCTCAATCCGAAATCTGATGATAAGCGTGAAATCGCGTTCGGGGACGTTAGTTTCCGTAAAGGAG
ATAAGGTCTTACAGTTAGTCAATCGACCTAACGATAATATCTTCAATGGTGATATCGGCGTCATCGTTGGTGTCTTCTGG
GCGAAAGAGAACGAACTCGATAAGGATATTATTATCGTCGATTTTGAAGGTAACGAAATTATCTTTACGAAACAAGATTT
CTTAGAGCTTACACACGCGTATTGTACTTCGATTCATAAATCACAAGGCTCTGAATTTCCTATCGTCATTATGCCTATGG
TGAAACAATATTATCGCATGTTACAACGTCCAATCCTTTATACTGGACTTACACGTGCGAAACAATCCCTTGTGCTATTA
GGTGACCCTGAAGCTTTCCATATTGGATTGACTACTCAAGGACAAACACGGTTGACCCAACTACGCCACATCGTGCAATC
GTACTTTAATATCACTACAGAAACGGATGAGAATGAATCAGACGCTCCAGATCAAGCGTCACAAACAGCGACAGAAAGTG
CAGCAGCTGATTCCACGCAACAAGAGGCTGAATCTTTTCAGAAAGACTCATCATCTGTCGTACTTACCGAAGAAACGATC
TACCAAATCGATCCGATGATTAACATGGGCCAAGTCACACCTTACGATTTCGTGAAACAGTGA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-720)

• AAA domain (AAA_30) (339-545)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	48.344	99.39	0.48