Detailed information NTG0051676

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: KW2_RS08560
• Genome accession: NC_022369
• Coordinates: 1811626..1814127 (-)
• Length: 833 a.a.
• NCBI ID: WP_021037668.1
• Uniprot ID: -
• Organism: Lactococcus cremoris subsp. cremoris KW2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1806626..1819127

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KW2_RS08535 (kw2_1712)	-	1807776..1808459 (+)	684	WP_021037664.1	LutC/YkgG family protein	-
KW2_RS08540 (kw2_1713)	-	1808536..1809249 (-)	714	WP_021037665.1	Bax inhibitor-1/YccA family protein	-
KW2_RS08545 (kw2_1714)	-	1809363..1810277 (-)	915	WP_021037666.1	diacylglycerol/lipid kinase family protein	-
KW2_RS08550 (kw2_1715)	-	1810457..1810969 (-)	513	WP_021037667.1	HD domain-containing protein	-
KW2_RS08555 (kw2_1716)	rpsT	1811299..1811532 (+)	234	WP_011676734.1	30S ribosomal protein S20	-
KW2_RS08560 (kw2_1717)	recD/recD2/recDB	1811626..1814127 (-)	2502	WP_021037668.1	ATP-dependent RecD-like DNA helicase	Machinery gene
KW2_RS08565 (kw2_1718)	-	1814124..1814717 (-)	594	WP_021037669.1	histidine phosphatase family protein	-
KW2_RS08570 (kw2_1719)	pheA	1814720..1815559 (-)	840	WP_021037670.1	prephenate dehydratase	-
KW2_RS08575 (kw2_1720)	-	1815561..1816049 (-)	489	WP_011676738.1	shikimate kinase	-
KW2_RS08580 (kw2_1721)	aroA	1816073..1817365 (-)	1293	WP_021037671.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
KW2_RS08585 (kw2_1722)	-	1817486..1818550 (-)	1065	WP_021037672.1	prephenate dehydrogenase	-

Sequence

Protein

• Length: 833 a.a.
• Molecular weight: 92681.88 Da
• Isoelectric Point: 4.4518

>NTDB_id=51676 KW2_RS08560 WP_021037668.1 1811626..1814127(-) (recD/recD2/recDB) [Lactococcus cremoris subsp. cremoris KW2]
MTDKTYVTGSIEAIFFSNPSNFYKVLLIEIDETNAEYDDFEIVVNGTIGDVVEGDSYTFYGQLTQHPKYGEQLQVSQYEK
AVPTSGAGLVKYFSSDKFPGIGKKTAEKIVETFPENTVDSILEAPEKLDGLLTLARKNSFIKRLRENHGMEKVLTKLAEY
GLPSKLTFQIYELYKEETIEKIEENPYQLVEEVKGVGFKTADKIASELGIEADSPNRFRAALMHEVNTHSQATGDTYIEA
KNLLELTIDLLEEARNIEVNPAEVAAEINGLIIDGKVQQEGTKIFENSLFFAEDGIRKSLTALTNRSGKDFADEKLLTVL
EEVEKDLEITYDELQKQAIIGAMNQQFFILTGGPGTGKTTIINGFIETYARLYQLDLDPDHYNDDVFPILLAAPTGRASR
RMNELTGLPAATIHRHLGLGQDEAEDALGNELSGSLLIVDEFSMVDTWLANKLFQAIPGSMKVLLVGDADQLPSVGPGQI
FADLLKIPEIPSVKLDKIFRQGDDSTITDLAHHIKDGQLPADFTVKKPDRSYFEVSANFVPQMVEQIASAWQKRGNNPFE
LQILAPMYKGAAGINAMNILLQNLFNPLNDRLEFALGDMKFREGDKVLHLVNDAEANVFNGDLGQIVELIAAKYTDSKQD
EIVMDFDGQELTYPRAEWYKITLAYAMSIHKSQGSEFSTVIVPMVSSYSRMLERNLLYTAITRAKQSLILLGEERAFAQA
VAREGANRKTFLVERFKDDKPAAENLSVDSLTKKVTDKKEISNKEKNSGSAADLDLENFSGRKKTAPKVEEISLFDEETE
SLGNGILTEALILSGNFDPLIGLTEQDFAIFNK

Nucleotide

• Length: 2502 bp

>NTDB_id=51676 KW2_RS08560 WP_021037668.1 1811626..1814127(-) (recD/recD2/recDB) [Lactococcus cremoris subsp. cremoris KW2]
ATGACGGATAAAACTTATGTTACAGGCTCAATTGAAGCTATTTTTTTCTCTAATCCAAGCAATTTTTATAAAGTTTTATT
AATTGAGATTGATGAAACAAATGCTGAATATGATGATTTTGAAATTGTGGTCAATGGGACAATTGGCGATGTGGTCGAAG
GGGATTCTTATACTTTTTATGGGCAATTAACCCAGCATCCAAAGTATGGGGAACAATTGCAAGTCAGTCAATATGAAAAA
GCTGTGCCAACGTCTGGTGCTGGTTTGGTCAAGTATTTTTCATCAGATAAATTTCCAGGGATTGGTAAAAAAACGGCAGA
GAAAATTGTTGAAACTTTTCCTGAAAATACGGTAGATTCTATTTTAGAAGCGCCTGAGAAATTGGATGGTTTATTAACTC
TAGCCAGAAAAAATTCATTTATCAAACGTTTGCGTGAAAATCATGGTATGGAAAAAGTGCTGACCAAGCTTGCAGAGTAT
GGCTTGCCAAGTAAACTCACTTTTCAAATCTATGAGTTGTACAAAGAGGAAACGATTGAAAAAATTGAGGAAAATCCTTA
TCAACTTGTGGAAGAAGTTAAAGGGGTGGGCTTTAAAACTGCCGATAAAATTGCGAGTGAACTAGGGATTGAAGCGGATA
GTCCAAATCGTTTTCGAGCGGCTTTGATGCACGAGGTCAATACGCATTCGCAAGCAACGGGTGACACTTATATTGAAGCT
AAAAACTTGTTGGAATTGACGATTGATTTACTTGAAGAAGCCAGAAATATTGAGGTCAATCCAGCTGAAGTTGCTGCGGA
AATCAACGGTTTAATTATTGATGGAAAAGTACAGCAAGAAGGAACGAAAATATTTGAAAATTCCTTGTTTTTTGCTGAAG
ACGGTATCCGAAAATCACTGACAGCCTTAACTAATCGTTCGGGAAAAGATTTTGCTGACGAAAAGTTACTGACAGTTTTG
GAAGAGGTAGAAAAAGATTTAGAGATTACTTATGATGAACTTCAGAAACAGGCCATCATTGGAGCGATGAATCAGCAATT
TTTCATTTTGACTGGGGGACCAGGAACGGGGAAAACAACGATTATTAATGGTTTCATTGAAACTTATGCCCGTCTTTATC
AGTTAGATTTAGACCCTGACCATTATAATGATGACGTTTTTCCTATTTTACTGGCAGCACCGACTGGTCGCGCTTCAAGA
CGGATGAATGAGTTGACTGGACTTCCAGCAGCAACAATTCATCGGCACTTAGGCTTAGGGCAAGATGAGGCAGAAGATGC
GCTTGGTAATGAGTTGTCAGGTTCACTTTTGATTGTCGATGAATTTTCAATGGTTGATACTTGGCTAGCCAACAAACTTT
TTCAAGCCATTCCTGGTTCAATGAAAGTCCTTCTCGTTGGCGATGCTGACCAACTTCCTTCTGTGGGCCCTGGACAAATT
TTTGCAGATTTATTAAAAATTCCAGAAATTCCGTCAGTAAAATTGGATAAGATTTTTCGTCAGGGAGATGATTCAACGAT
TACCGATTTGGCTCATCATATCAAAGATGGACAATTACCTGCAGATTTTACGGTGAAAAAACCTGACCGTTCTTATTTTG
AAGTGAGTGCTAATTTTGTACCACAAATGGTGGAGCAAATTGCTAGTGCTTGGCAAAAAAGAGGAAATAATCCTTTTGAA
TTACAAATTTTAGCGCCCATGTATAAAGGGGCCGCTGGGATTAATGCAATGAATATTCTCTTGCAAAATCTCTTTAATCC
GCTTAATGACCGACTTGAATTTGCTTTGGGTGATATGAAATTTCGTGAAGGAGATAAAGTATTACATTTAGTCAATGACG
CTGAGGCCAATGTATTCAATGGAGATTTAGGACAAATTGTTGAATTGATTGCAGCAAAATATACTGACAGTAAACAAGAT
GAGATTGTGATGGATTTTGATGGTCAAGAATTGACCTATCCCAGAGCTGAATGGTATAAAATTACGCTTGCTTATGCTAT
GTCTATCCATAAATCTCAAGGTTCGGAATTTTCAACGGTCATCGTCCCGATGGTCTCTTCTTATTCACGGATGTTAGAGC
GAAATTTACTCTATACAGCAATCACGCGGGCAAAGCAAAGCTTAATTTTATTGGGTGAAGAGCGTGCCTTTGCTCAGGCT
GTGGCGCGTGAAGGAGCCAATCGAAAAACTTTTCTCGTTGAGCGTTTTAAGGATGATAAGCCTGCCGCAGAAAATCTGTC
AGTAGATTCCTTAACTAAAAAAGTTACTGACAAGAAGGAAATATCTAACAAAGAGAAAAATTCTGGATCAGCAGCAGACT
TAGACTTAGAAAATTTTTCTGGCAGAAAAAAAACAGCACCAAAAGTTGAGGAAATTTCATTATTTGATGAAGAAACTGAA
AGTTTGGGGAATGGAATTCTAACAGAAGCGCTAATTTTATCTGGCAATTTTGATCCCTTAATTGGATTGACTGAGCAAGA
TTTTGCGATTTTTAATAAATAA

Domains

Predicted by InterProScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (146-237)

• AAA domain (AAA_30) (331-521)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (664-710)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (577-646)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	41.522	89.916	0.373