Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   I6H45_RS05835 Genome accession   NZ_CP066014
Coordinates   1197246..1199006 (-) Length   586 a.a.
NCBI ID   WP_004839011.1    Uniprot ID   A0A7T4K4P9
Organism   Anaerococcus vaginalis strain FDAARGOS_988     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1192246..1204006
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H45_RS05820 (I6H45_05820) nhaC 1192837..1194390 (-) 1554 WP_039920525.1 Na+/H+ antiporter NhaC -
  I6H45_RS05825 (I6H45_05825) - 1194794..1195207 (-) 414 WP_004839009.1 DUF2871 domain-containing protein -
  I6H45_RS05830 (I6H45_05830) - 1195220..1197253 (-) 2034 WP_004839010.1 ABC transporter ATP-binding protein -
  I6H45_RS05835 (I6H45_05835) rcrP 1197246..1199006 (-) 1761 WP_004839011.1 ABC transporter ATP-binding protein Regulator
  I6H45_RS05840 (I6H45_05840) - 1198990..1199463 (-) 474 WP_004839012.1 MarR family winged helix-turn-helix transcriptional regulator -
  I6H45_RS05845 (I6H45_05845) - 1199589..1200071 (-) 483 WP_004839013.1 hotdog domain-containing protein -
  I6H45_RS05850 (I6H45_05850) - 1200081..1201121 (-) 1041 WP_004839014.1 hypothetical protein -
  I6H45_RS05855 (I6H45_05855) - 1201248..1201736 (-) 489 WP_004839015.1 prolyl-tRNA synthetase associated domain-containing protein -
  I6H45_RS05860 (I6H45_05860) - 1201887..1202405 (-) 519 WP_004839016.1 adenine phosphoribosyltransferase -
  I6H45_RS05865 (I6H45_05865) - 1202416..1203321 (-) 906 WP_004839017.1 LCP family protein -
  I6H45_RS05870 (I6H45_05870) - 1203330..1203803 (-) 474 WP_004839018.1 small multi-drug export protein -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 65932.82 Da        Isoelectric Point: 5.3512

>NTDB_id=516353 I6H45_RS05835 WP_004839011.1 1197246..1199006(-) (rcrP) [Anaerococcus vaginalis strain FDAARGOS_988]
MIKLFKNLKKIDIIYGLIAIIFIVFQVYLDLKMPDYMSKITVLVQSEVSELDEVLKYGGYMMACAFGSMLSAVITGYLIS
TVSARFSKNVGRKLFDKVTSFSSEEINEFSTPSLITRNTNDITQVQMFLAMGLQMLIKSPITAIWAINKILDKSWQWSAA
TSVAVVFLLVVVGIIMAIVVPKFKLVQNLIDKLNRVTRENLIGIRVIRAFNAEKYQEEKFEEVNADLTNLQTFNQKMFAL
MMPIMFFVMNFLALAIYFIGSRLIDGAMIAEKIELFGNMVVFSSYAMQVIMSFLMLAFIFMMLPRANVSADRINEVLNTK
IQIEDGKKSYKDNGIRGKVEFQNVYFSYPDAEEAVLENISFTANRGETVAFIGSTGSGKSTLINLIPRFYDVSGGKILVD
GIDVRDYPLKDLYNKLGYVSQKAFLFNESIENNINFGEGLKEISDKDIDKALEIAQASEFVNKMDDGKKSMIAQSGTNIS
GGQKQRLSIARAIAKDPEIFIFDDSFSALDYKTDAILRNELKKSTENSTKLIVAQRIGTIMNADEIIVLDQGKIVGKGRH
KELLENCDVYREIALSQLSEEELYNG

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=516353 I6H45_RS05835 WP_004839011.1 1197246..1199006(-) (rcrP) [Anaerococcus vaginalis strain FDAARGOS_988]
ATGATAAAATTATTTAAAAATTTGAAAAAAATAGACATAATTTATGGTTTAATAGCCATAATTTTTATTGTCTTTCAAGT
TTATTTAGATTTGAAAATGCCTGATTATATGTCAAAGATTACGGTGTTGGTTCAATCTGAAGTAAGTGAGCTTGATGAAG
TTTTAAAATACGGTGGCTACATGATGGCTTGCGCCTTTGGCTCAATGCTTAGTGCTGTTATTACTGGTTATTTGATTTCT
ACGGTTTCTGCCAGATTTTCAAAAAATGTTGGAAGAAAATTATTTGATAAGGTTACAAGTTTTTCGAGTGAGGAAATAAA
TGAATTTTCTACGCCAAGCCTTATTACAAGAAATACAAATGATATAACCCAGGTACAAATGTTTTTGGCTATGGGCTTAC
AAATGTTAATTAAATCGCCAATAACTGCAATTTGGGCTATAAATAAAATTCTTGATAAAAGCTGGCAATGGTCAGCTGCT
ACAAGCGTTGCTGTAGTATTTTTATTGGTTGTTGTAGGAATAATAATGGCGATTGTAGTTCCAAAATTTAAATTAGTTCA
AAATTTAATTGATAAATTAAATAGGGTTACTAGAGAAAATTTAATTGGAATTAGAGTTATTAGAGCCTTTAATGCTGAAA
AATATCAAGAAGAAAAATTTGAAGAAGTAAATGCAGATTTGACAAATTTACAAACTTTTAACCAAAAAATGTTTGCTTTA
ATGATGCCAATTATGTTTTTTGTAATGAATTTTTTGGCTTTGGCAATTTATTTTATTGGCTCAAGATTAATTGATGGGGC
AATGATTGCAGAAAAAATTGAATTATTTGGAAATATGGTTGTATTTTCATCTTATGCTATGCAAGTTATTATGTCATTTT
TAATGTTAGCCTTTATTTTTATGATGCTACCAAGAGCAAATGTATCAGCAGATCGTATTAATGAAGTTTTAAATACAAAA
ATTCAAATAGAAGATGGGAAAAAATCTTATAAAGATAATGGAATTAGAGGTAAGGTAGAATTTCAAAATGTATATTTCTC
ATATCCTGATGCAGAAGAAGCAGTTTTAGAAAATATTTCTTTTACAGCAAATAGGGGAGAAACTGTTGCCTTTATCGGCT
CAACTGGGTCAGGAAAATCTACTTTGATAAATCTTATTCCAAGATTTTACGATGTAAGTGGCGGAAAAATTTTAGTAGAT
GGGATTGATGTTAGAGATTATCCATTAAAAGATTTATATAATAAATTAGGCTATGTTTCACAAAAAGCATTTTTATTCAA
TGAAAGCATAGAAAATAATATAAATTTTGGAGAAGGATTAAAGGAAATTAGTGATAAAGATATAGATAAGGCATTAGAAA
TTGCTCAAGCAAGTGAGTTTGTAAATAAAATGGACGATGGCAAAAAATCTATGATAGCTCAAAGTGGTACAAATATTTCT
GGAGGACAAAAACAAAGATTATCTATTGCTAGAGCAATAGCAAAAGATCCTGAAATATTTATCTTCGATGATTCATTCTC
AGCGCTTGATTACAAAACAGATGCGATTTTGAGAAATGAATTAAAAAAATCTACAGAAAATTCTACCAAATTAATAGTTG
CTCAAAGGATTGGAACTATTATGAATGCAGATGAAATAATAGTTTTAGATCAAGGAAAAATAGTTGGAAAAGGACGCCAC
AAAGAATTATTAGAAAACTGTGATGTTTATAGGGAAATTGCCTTATCCCAACTAAGTGAGGAGGAATTATATAATGGCTA
G

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(356-505)

ABC transporter transmembrane region (ABC_membrane)

(17-293)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T4K4P9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

50.5

100

0.517