Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   KX728_RS07600 Genome accession   NZ_CP079724
Coordinates   1550648..1552984 (-) Length   778 a.a.
NCBI ID   WP_215804366.1    Uniprot ID   -
Organism   Streptococcus oralis strain 34     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1545648..1557984
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KX728_RS07580 (KX728_07575) - 1546213..1547112 (-) 900 WP_215804370.1 TDT family transporter -
  KX728_RS07585 (KX728_07580) - 1547220..1548284 (-) 1065 WP_215804369.1 acyl-CoA dehydrogenase family protein -
  KX728_RS07590 (KX728_07585) - 1548299..1548847 (-) 549 WP_215804368.1 carboxymuconolactone decarboxylase family protein -
  KX728_RS07595 (KX728_07590) - 1548979..1550301 (-) 1323 WP_215804367.1 sodium:alanine symporter family protein -
  KX728_RS07600 (KX728_07595) mutS/mutS2 1550648..1552984 (-) 2337 WP_215804366.1 endonuclease MutS2 Machinery gene
  KX728_RS07605 (KX728_07600) - 1553085..1553633 (-) 549 WP_215804365.1 CvpA family protein -
  KX728_RS07610 (KX728_07605) zapA 1553630..1553932 (-) 303 WP_000002028.1 cell division protein ZapA -
  KX728_RS07615 (KX728_07610) rnhC 1554019..1554900 (+) 882 WP_215804364.1 ribonuclease HIII -
  KX728_RS07620 (KX728_07615) lepB 1554904..1555518 (+) 615 WP_001083992.1 signal peptidase I -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87677.60 Da        Isoelectric Point: 7.1500

>NTDB_id=514649 KX728_RS07600 WP_215804366.1 1550648..1552984(-) (mutS/mutS2) [Streptococcus oralis strain 34]
MNTKILETLEFNKIKALFEPHLLTEQGLEELKGLAPTAKTDKIKQAFTEMEEMQALFVEQPHFTILATREISAVCKRLEM
GADLNIEEFLLLKRVLLASRELQGFYANLENVRLEQLARWFEKLHDFPHLQGSLQALNDAGFIENFASEELARIRRKIHD
SESQVRNVLQDLLKQKVQMLTEGIIASRNGRQVLPVKNTYRNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADER
YEMIRILQELSERVRPHAAEIANDAWIISHLDLIRAKVRFIQERQAVVPQLSENQEIQLLHVRHPLVKNAVANDVHFGKE
LTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPILADKGSRVGIFEEVFADIGDEQSIEQSLSTFSSHMTNIVDILGKVN
QHSLLLLDELGAGTDPQEGAALAMAILEDLRLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTYRFMQGVPG
RSNAFEIAKRLGLSDVIVGDASQQVNQDNDVNRIIEQLEEQTLESRKRLDNIREVEQENLKMNRALKKLYNELNREKETE
LNKAREQAAEIVELALNESDQILKNLHSKSQLKPHEIIEAKSKLKKLAPEKVDLSKNKVLQKAKKKRAPKVGDDIVVLSY
GQRGTLTNQLKDGRWEAQVGLIKMTLEEKEFDLVQAQQEAPVKKKQVNVVKRASDRGPQARLDLRGKRYEEAMNELDAFI
DQALLNNMAQVDIIHGIGTGVIREGVTKYLQRNKHVKTFGYAPQNAGGSGATIVTFKG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=514649 KX728_RS07600 WP_215804366.1 1550648..1552984(-) (mutS/mutS2) [Streptococcus oralis strain 34]
ATGAATACAAAAATACTAGAAACCTTAGAATTTAATAAAATCAAAGCCTTGTTTGAACCGCATCTCCTGACAGAACAAGG
ACTAGAGGAGCTAAAAGGCTTGGCTCCGACTGCCAAGACTGATAAGATCAAGCAAGCCTTTACAGAGATGGAGGAAATGC
AAGCTCTATTTGTGGAGCAACCCCACTTTACCATCCTAGCGACACGTGAGATTTCAGCTGTCTGCAAGCGTCTGGAGATG
GGGGCGGACCTCAATATTGAGGAGTTCCTGCTCCTCAAACGGGTCTTGCTTGCTAGCAGAGAGTTGCAAGGTTTTTATGC
CAATCTTGAAAATGTACGTTTGGAGCAGTTGGCGAGATGGTTTGAAAAACTACATGATTTTCCACACTTGCAAGGAAGTC
TCCAAGCCCTAAATGATGCAGGATTTATCGAGAATTTTGCCAGCGAAGAACTGGCACGCATCCGTCGGAAAATCCATGAT
AGCGAGAGTCAAGTTCGAAATGTCTTGCAAGACTTGCTCAAGCAAAAAGTGCAAATGTTGACGGAAGGCATAATCGCTAG
CCGAAATGGCCGTCAAGTCTTACCCGTGAAAAACACTTACCGCAACAAGATTGCGGGTGTTGTCCATGACATCTCTGCCA
GTGGAAACACCGTCTATATCGAACCCCGTGAAGTGGTCAAGCTGAGCGAAGAAATCGCTAGTCTGCGAGCAGACGAACGC
TATGAGATGATTCGCATCCTACAGGAACTCTCAGAACGGGTCCGCCCTCATGCTGCAGAGATTGCTAATGACGCATGGAT
TATCAGCCATTTAGACTTGATTCGTGCCAAGGTGCGTTTCATTCAAGAAAGACAAGCAGTTGTTCCTCAACTTTCAGAGA
ACCAAGAGATTCAACTCCTTCATGTCCGCCATCCTTTGGTCAAGAATGCTGTCGCAAATGATGTACACTTTGGTAAGGAA
TTAACGGCTATTGTCATTACAGGTCCCAATACTGGTGGGAAGACCATCATGCTCAAAACCCTGGGCTTGACTCAACTCAT
GGCCCAGTCAGGCTTGCCCATTTTAGCTGATAAAGGAAGCCGTGTTGGTATTTTCGAAGAAGTCTTTGCAGATATTGGCG
ATGAACAGTCTATTGAGCAGAGTTTGTCTACCTTCTCCAGCCACATGACCAATATCGTAGATATTCTTGGCAAGGTCAAT
CAGCACTCGCTCTTATTGCTAGATGAGCTCGGGGCTGGGACCGATCCGCAGGAAGGAGCAGCACTTGCTATGGCTATTCT
GGAGGATCTTCGTCTGCGTCAGGTCAAGACTATGGCGACGACCCACTATCCAGAACTCAAGGCTTATGGTATTGAGACAG
CCTTTGTGCAAAATGCCAGTATGGAGTTTGATACAGCCAGCCTGCGTCCGACCTATCGCTTTATGCAGGGAGTTCCTGGT
CGAAGCAATGCCTTTGAAATCGCCAAACGCCTAGGACTGTCAGATGTCATCGTCGGGGATGCCAGTCAGCAGGTCAATCA
AGATAATGATGTCAACCGTATCATTGAGCAATTGGAAGAGCAAACGCTTGAAAGCCGTAAACGCTTGGACAATATCCGTG
AGGTGGAGCAAGAAAACCTCAAGATGAACCGTGCACTCAAAAAACTCTACAACGAACTCAATCGTGAAAAAGAAACCGAG
CTTAACAAGGCGCGTGAACAAGCTGCCGAGATTGTGGAACTCGCTCTAAATGAGAGTGACCAGATTCTCAAGAACCTCCA
CAGTAAGTCTCAACTCAAACCCCACGAAATCATTGAAGCCAAGTCTAAACTGAAAAAACTAGCCCCTGAAAAAGTCGACT
TGTCTAAAAACAAGGTCCTTCAAAAGGCCAAGAAAAAACGAGCTCCGAAGGTGGGGGATGATATTGTGGTCCTCAGTTAT
GGACAACGTGGAACCTTGACCAATCAGCTTAAGGACGGCCGTTGGGAAGCCCAAGTCGGTTTGATCAAGATGACCTTGGA
AGAGAAAGAATTTGACCTTGTTCAGGCCCAGCAAGAAGCCCCAGTCAAGAAGAAACAAGTCAATGTCGTCAAACGTGCTT
CTGATCGTGGTCCGCAAGCCAGACTGGATCTTCGTGGCAAACGGTACGAAGAGGCCATGAATGAGCTGGACGCCTTTATT
GACCAAGCCCTGCTCAATAACATGGCGCAAGTCGACATCATCCATGGTATCGGAACAGGTGTCATCCGTGAAGGAGTCAC
CAAATACCTACAAAGAAACAAGCATGTTAAGACTTTCGGCTATGCTCCACAGAATGCTGGAGGCAGTGGCGCAACCATTG
TGACCTTTAAAGGATAG

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-506)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)

Smr domain (Smr)

(702-777)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

40.558

100

0.411