Detailed information NTG0514318

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: STRR_RS04005
• Genome accession: NZ_CP065788
• Coordinates: 762799..763680 (+)
• Length: 293 a.a.
• NCBI ID: WP_071417356.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain RR
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 757799..768680

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STRR_RS03975 (STRR_03950)	-	758809..759261 (+)	453	WP_050983521.1	hypothetical protein	-
STRR_RS03980 (STRR_03955)	-	759251..759754 (+)	504	WP_224102963.1	DUF4832 domain-containing protein	-
STRR_RS03985 (STRR_03960)	galE	759769..760782 (+)	1014	WP_014727437.1	UDP-glucose 4-epimerase GalE	-
STRR_RS03990 (STRR_03965)	-	760970..761206 (+)	237	WP_002946959.1	DUF1146 family protein	-
STRR_RS03995 (STRR_03970)	murA	761276..762547 (+)	1272	WP_024704149.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
STRR_RS04000 (STRR_03975)	-	762549..762737 (+)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
STRR_RS04005 (STRR_03980)	endA	762799..763680 (+)	882	WP_071417356.1	DNA/RNA non-specific endonuclease	Machinery gene
STRR_RS04010 (STRR_03985)	-	763751..764401 (-)	651	WP_014608375.1	amino acid ABC transporter permease	-
STRR_RS04015 (STRR_03990)	-	764413..765111 (-)	699	WP_014608374.1	amino acid ABC transporter permease	-
STRR_RS04020 (STRR_03995)	-	765129..765962 (-)	834	WP_011681208.1	transporter substrate-binding domain-containing protein	-
STRR_RS04025 (STRR_04000)	-	765974..766741 (-)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
STRR_RS04030 (STRR_04005)	vicR	767268..767975 (+)	708	WP_011681206.1	response regulator YycF	Regulator

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31831.58 Da
• Isoelectric Point: 10.1789

>NTDB_id=514318 STRR_RS04005 WP_071417356.1 762799..763680(+) (endA) [Streptococcus thermophilus strain RR]
MVKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLSETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLLRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=514318 STRR_RS04005 WP_071417356.1 762799..763680(+) (endA) [Streptococcus thermophilus strain RR]
ATGGTAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTAATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCTCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTTCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGACGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTATTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	71.967	81.57	0.587
endA	Streptococcus pneumoniae D39	71.967	81.57	0.587
endA	Streptococcus pneumoniae R6	71.967	81.57	0.587
endA	Streptococcus pneumoniae TIGR4	71.967	81.57	0.587