Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   KWY62_RS04340 Genome accession   NZ_CP079193
Coordinates   856783..858525 (+) Length   580 a.a.
NCBI ID   WP_202847455.1    Uniprot ID   -
Organism   Streptococcus suis strain ID41570     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 851783..863525
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KWY62_RS04320 (KWY62_04320) - 852352..853170 (+) 819 WP_002935241.1 NAD kinase -
  KWY62_RS04325 (KWY62_04325) - 853170..854063 (+) 894 WP_024380949.1 RluA family pseudouridine synthase -
  KWY62_RS04330 (KWY62_04330) pta 854081..855055 (+) 975 WP_012775151.1 phosphate acetyltransferase -
  KWY62_RS04335 (KWY62_04335) - 855057..856796 (+) 1740 WP_044681726.1 ABC transporter ATP-binding protein -
  KWY62_RS04340 (KWY62_04340) rcrQ 856783..858525 (+) 1743 WP_202847455.1 ABC transporter ATP-binding protein Regulator
  KWY62_RS04345 (KWY62_04345) - 858509..858901 (+) 393 WP_044681721.1 PaaI family thioesterase -
  KWY62_RS04350 (KWY62_04350) mutY 859135..860295 (+) 1161 WP_202847454.1 A/G-specific adenine glycosylase -
  KWY62_RS04355 (KWY62_04355) - 860958..861758 (-) 801 WP_024383594.1 XRE family transcriptional regulator -
  KWY62_RS04360 (KWY62_04360) - 861889..862359 (+) 471 WP_024385761.1 hypothetical protein -
  KWY62_RS04365 (KWY62_04365) - 862379..862921 (+) 543 WP_202847723.1 hypothetical protein -

Sequence

Protein


Download         Length: 580 a.a.        Molecular weight: 64465.50 Da        Isoelectric Point: 4.9180

>NTDB_id=514284 KWY62_RS04340 WP_202847455.1 856783..858525(+) (rcrQ) [Streptococcus suis strain ID41570]
MGQSSFKELIRLVLRQPLRMSLMLVGTLVQVLLTVYLPILIGQAVDAVLIADGQVLLGILGKMVMVILLNTLVQWYLPLV
TNRLVYGMVADLREQVYVKLYQMPLSYLDRQSVGDLVARFSSDSEQLTNGLLMIFNQFFIGILTIFLTIFTMARLDLTMM
LLVVALTPVSLLVARYIAKKSYGYYRQQTQARGKQSQHLEESISQLTLVQSFNAQEQFTQGFQVVNDQYATYSQQAIFAS
STVNPSTRFINAIIYALLAGLGALRIMAGNFTVGALTTFLNYASQYSKPFNDISSVLSELQSALACADRLFAILALDSID
DQAEREIDSEELKGAISFENVSFSYSPDRSLIEQLNINVKSGQKVAIVGPTGAGKSTMINLLMRFYDVTAGQITLDGVPI
SQYSREDLRRQIGMVLQETWIKSGTIHDNIAYGYPNATRELVIEAAKAANADFFIRQLPQGYDTVLADGGEALSQGQRQL
LSIARVFVKIPKILILDEATSSIDTRTEILVQEAFAKLMEGRTSFIIAHRLSTIQSADLILVMVDGKIVEQGNHEALMAE
QGVYYQMQTSQQTEEDESVR

Nucleotide


Download         Length: 1743 bp        

>NTDB_id=514284 KWY62_RS04340 WP_202847455.1 856783..858525(+) (rcrQ) [Streptococcus suis strain ID41570]
ATGGGACAATCTAGTTTTAAGGAACTGATTAGATTGGTTTTACGCCAGCCTCTTCGAATGTCCTTGATGTTGGTGGGAAC
TTTGGTGCAAGTGCTTCTGACAGTTTATCTGCCGATCTTGATTGGTCAGGCAGTCGATGCCGTATTGATAGCGGATGGTC
AGGTCTTGCTCGGTATCTTAGGCAAAATGGTAATGGTTATCTTGCTTAATACGCTGGTGCAATGGTACTTACCTTTGGTA
ACCAATCGCTTGGTTTACGGAATGGTGGCCGATTTGCGTGAACAGGTCTATGTGAAGCTGTACCAGATGCCCCTATCTTA
TCTTGATCGTCAATCAGTCGGTGATTTGGTGGCTCGTTTTTCAAGTGATAGTGAGCAATTAACAAATGGTCTCTTGATGA
TTTTTAATCAATTTTTCATTGGTATCTTGACTATTTTCCTAACTATTTTCACTATGGCTAGGCTTGACTTGACGATGATG
TTGCTGGTTGTGGCATTAACTCCAGTTTCTCTGCTTGTGGCACGCTATATCGCTAAGAAATCCTATGGTTATTATAGACA
ACAGACTCAGGCACGTGGGAAGCAATCTCAGCATTTGGAAGAGTCCATCAGTCAATTGACACTGGTTCAATCTTTCAATG
CTCAAGAGCAATTTACGCAAGGTTTTCAAGTTGTGAATGACCAGTATGCGACCTATTCCCAACAGGCTATCTTTGCCTCT
TCAACGGTCAATCCAAGCACTCGCTTTATCAATGCTATTATTTATGCCTTACTTGCAGGACTTGGAGCTCTGAGAATTAT
GGCAGGGAATTTCACAGTGGGGGCACTGACAACTTTTCTCAATTATGCTAGTCAGTACAGCAAGCCTTTTAATGATATTT
CCTCGGTCCTATCGGAATTGCAGAGCGCCTTAGCTTGTGCAGACAGACTGTTTGCTATCTTGGCTTTAGATAGCATTGAC
GATCAGGCTGAGCGGGAAATCGATTCGGAGGAGTTGAAGGGAGCTATTTCCTTTGAAAATGTGTCTTTCTCTTATAGCCC
TGACCGTTCTCTTATAGAACAGTTGAACATTAATGTCAAATCTGGCCAAAAGGTAGCCATTGTTGGACCTACTGGTGCTG
GTAAATCAACCATGATTAACCTGCTTATGCGTTTCTACGATGTAACGGCTGGTCAAATTACTTTAGATGGGGTTCCGATT
AGCCAGTACAGTCGTGAGGATCTTCGCAGACAGATTGGGATGGTTTTACAGGAGACATGGATCAAATCTGGTACCATTCA
TGATAATATTGCCTATGGCTATCCAAATGCCACGCGGGAATTGGTCATTGAGGCGGCTAAGGCAGCTAATGCAGACTTCT
TTATTCGTCAGCTTCCGCAGGGGTACGATACAGTTTTGGCAGATGGAGGTGAAGCCTTATCCCAGGGACAACGTCAGCTT
TTGTCTATTGCGCGTGTCTTTGTTAAAATACCTAAAATCCTGATTTTAGATGAGGCGACTTCCTCTATTGATACACGGAC
AGAAATTTTAGTACAGGAAGCATTTGCCAAATTGATGGAAGGACGGACCAGCTTTATTATTGCTCATCGCCTATCAACCA
TTCAATCAGCTGACTTGATTTTGGTCATGGTGGACGGAAAAATTGTTGAACAAGGGAATCATGAAGCATTGATGGCTGAA
CAAGGCGTTTATTATCAAATGCAAACAAGTCAGCAGACAGAGGAGGATGAAAGTGTTAGATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(353-501)

ABC transporter transmembrane region (ABC_membrane)

(22-289)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.801

97.759

0.379