Detailed information NTG0513404

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: I6G39_RS05490
• Genome accession: NZ_CP065712
• Coordinates: 1100460..1102889 (+)
• Length: 809 a.a.
• NCBI ID: WP_059107228.1
• Uniprot ID: A0AAP8PMM7
• Organism: Staphylococcus auricularis strain FDAARGOS_882
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1095460..1107889

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G39_RS05465 (I6G39_05465)	-	1095665..1095850 (+)	186	WP_059107223.1	CsbD family protein	-
I6G39_RS05470 (I6G39_05470)	-	1096089..1097090 (-)	1002	WP_059107224.1	LLM class flavin-dependent oxidoreductase	-
I6G39_RS05475 (I6G39_05475)	-	1097402..1098544 (+)	1143	WP_059107225.1	cysteine desulfurase family protein	-
I6G39_RS05480 (I6G39_05480)	mnmA	1098545..1099657 (+)	1113	WP_059107226.1	tRNA 2-thiouridine(34) synthase MnmA	-
I6G39_RS05485 (I6G39_05485)	-	1099790..1100458 (+)	669	WP_059107227.1	tetratricopeptide repeat protein	-
I6G39_RS05490 (I6G39_05490)	recD2	1100460..1102889 (+)	2430	WP_059107228.1	ATP-dependent RecD-like DNA helicase	Machinery gene
I6G39_RS05495 (I6G39_05495)	alaS	1103221..1105851 (+)	2631	WP_059107229.1	alanine--tRNA ligase	-
I6G39_RS05500 (I6G39_05500)	-	1105931..1106185 (+)	255	WP_059107230.1	IreB family regulatory phosphoprotein	-
I6G39_RS05505 (I6G39_05505)	ruvX	1106198..1106626 (+)	429	WP_059107231.1	Holliday junction resolvase RuvX	-
I6G39_RS05510 (I6G39_05510)	-	1106642..1106962 (+)	321	WP_059107232.1	DUF1292 domain-containing protein	-

Sequence

Protein

• Length: 809 a.a.
• Molecular weight: 91126.30 Da
• Isoelectric Point: 4.3927

>NTDB_id=513404 I6G39_RS05490 WP_059107228.1 1100460..1102889(+) (recD2) [Staphylococcus auricularis strain FDAARGOS_882]
MEEGPTLFEQTTVKGTVDAIVFQNKDNFYTVLKVEPSESDETFDSTPTVVGFFPDIVEGDVYTFKGQIVNHTKYGKQLKA
ETFEKELPQTKEAIISYLSSDLFKGVGKKTAQSIVNALGDNAINDILNDETLLSKVPGLSKKKQQQIAEQINANQETEKI
IIRLHDLGFGPKLAMNIYQTYMSDTLEIVEKKPYQLVYDVKGIGFNKADTLARNIGIAYDDPERIKAGLLYVLEEECVKQ
GHTYLPTSYVYEMTVDMLSQPPEETIETALVESMTQELIEETKLIEHEDQLAIPSLYYSELKSVQTLYRVFSYTHKMTEF
ELSDLQLHIGEIEERQEVSYAALQKEALQTAMNTKVMLLTGGPGTGKTTVIKGIVDLYAEVHGISLDYDDYSEDDYPVVL
AAPTGRAAKRLAEATGLEAMTIHRLIGWNQDTQPEDILDHEINARLIIIDEMSMVDTWLFHQFMSAVPLDAQIIFVGDED
QLPSVGPGQVFKDLIESKVIPRVNLTEVYRQQDGSSIIELAHHIKLGQPIDITKRYHDRNFIRCGAEQIPNVVEQIVSNA
VTKGYDMSDIQVLAPMYKGSAGIKKLNKVLQDILNPKAKDSREIEFGDVVFRKGDKVLQLVNRPNDNIFNGDIGVIVGVF
WAKENALNKDVLVVDFEGNEITFTRQDLIELTHAYCTSIHKSQGSEFPIVIMPMVKQYYRMLQKPILYTGLTRAKQSLVL
LGDPQAFDIGLNTEGKARMTQLCTFLKQYFGEDEDNNTEEHNSEVTDADSEEAETPTQEANFVLTETDMFSIDPMINMGK
VTPYDFNDD

Nucleotide

• Length: 2430 bp

>NTDB_id=513404 I6G39_RS05490 WP_059107228.1 1100460..1102889(+) (recD2) [Staphylococcus auricularis strain FDAARGOS_882]
ATGGAGGAAGGCCCTACATTGTTTGAACAGACGACAGTGAAAGGCACTGTTGACGCAATCGTATTCCAAAATAAAGATAA
TTTTTATACTGTGTTAAAAGTAGAGCCTAGTGAGTCAGATGAAACGTTTGATTCAACGCCAACGGTTGTAGGGTTCTTTC
CTGACATTGTAGAAGGTGATGTGTATACCTTCAAAGGCCAAATTGTTAATCACACCAAATATGGTAAGCAACTAAAAGCC
GAAACGTTTGAAAAAGAATTACCTCAAACAAAAGAAGCCATCATCAGTTATTTATCTAGCGATCTTTTTAAAGGTGTCGG
TAAAAAAACTGCTCAAAGTATTGTGAATGCCCTTGGAGATAATGCGATTAATGACATATTAAATGATGAAACATTACTGT
CTAAAGTGCCTGGGCTTTCGAAAAAGAAACAACAACAAATTGCTGAACAAATCAATGCAAACCAAGAAACAGAAAAAATT
ATTATCCGGTTACATGATTTAGGTTTCGGACCTAAACTGGCAATGAATATCTATCAAACATACATGAGTGATACGTTAGA
GATTGTAGAGAAAAAGCCCTACCAACTCGTTTATGATGTTAAGGGTATTGGTTTTAATAAAGCAGATACACTCGCACGTA
ATATTGGTATTGCTTATGACGATCCAGAACGCATTAAAGCGGGTTTACTTTATGTTCTCGAAGAAGAATGTGTGAAACAA
GGTCATACGTATCTCCCAACATCATATGTTTATGAGATGACAGTAGACATGTTGTCACAACCACCTGAAGAAACGATTGA
GACAGCGTTAGTTGAAAGCATGACGCAGGAATTGATTGAGGAAACTAAATTAATTGAACACGAAGATCAGCTCGCAATAC
CTAGCCTCTATTACTCCGAATTAAAGAGTGTCCAAACACTGTATAGAGTCTTTAGCTACACACATAAAATGACAGAATTT
GAATTATCAGATTTACAATTACATATCGGAGAAATTGAAGAACGACAAGAAGTCAGTTATGCCGCTTTACAAAAAGAAGC
ATTACAGACAGCGATGAATACGAAAGTCATGTTGCTCACAGGGGGCCCCGGAACTGGTAAAACAACAGTCATTAAAGGTA
TTGTTGATTTATATGCAGAAGTCCATGGTATTTCACTCGATTATGATGATTATAGCGAAGATGATTATCCAGTAGTGCTC
GCAGCGCCTACAGGTCGTGCAGCGAAACGGTTAGCTGAAGCGACAGGCTTAGAAGCGATGACGATTCACCGTTTAATTGG
ATGGAATCAGGATACCCAACCGGAAGACATTTTAGATCATGAAATTAATGCTCGGTTGATTATCATCGATGAGATGTCGA
TGGTAGATACATGGTTGTTCCATCAATTTATGAGTGCTGTGCCGTTAGATGCACAGATTATCTTTGTCGGTGATGAAGAC
CAGCTTCCATCTGTTGGACCAGGTCAAGTGTTCAAAGATTTAATTGAATCGAAAGTCATTCCTAGGGTGAACTTAACCGA
AGTTTATCGTCAACAAGATGGTTCAAGTATTATTGAACTCGCCCATCACATTAAATTGGGTCAACCGATTGATATTACGA
AACGGTATCACGATCGAAATTTCATCAGATGTGGTGCAGAACAAATTCCGAATGTTGTCGAGCAGATTGTATCGAATGCT
GTAACGAAAGGTTACGACATGAGTGATATTCAAGTCCTTGCACCGATGTATAAAGGCTCAGCAGGGATTAAAAAGCTCAA
TAAAGTACTGCAAGACATTTTAAACCCGAAAGCGAAAGACTCACGTGAAATTGAATTTGGTGATGTGGTCTTCCGTAAGG
GCGATAAAGTATTACAGCTTGTCAATCGACCTAACGATAATATCTTCAACGGAGATATTGGCGTTATTGTAGGAGTGTTT
TGGGCTAAAGAAAATGCGCTGAATAAAGATGTCTTAGTCGTTGATTTTGAAGGCAATGAAATTACCTTCACACGACAAGA
TTTAATTGAATTAACTCATGCTTATTGCACTTCGATCCATAAATCTCAAGGTTCGGAATTCCCAATCGTGATCATGCCAA
TGGTGAAACAATATTATCGCATGTTGCAAAAACCAATCCTTTATACAGGGTTAACAAGGGCGAAACAATCACTGGTGTTA
CTCGGAGATCCCCAAGCTTTTGACATTGGTCTTAATACTGAAGGTAAGGCACGGATGACACAGCTTTGTACATTCTTAAA
ACAATACTTCGGTGAAGATGAAGATAACAACACAGAAGAACACAATTCTGAAGTGACTGATGCAGATAGTGAGGAAGCAG
AAACACCAACACAAGAAGCTAATTTTGTATTGACGGAAACGGATATGTTCAGCATTGATCCAATGATTAATATGGGAAAA
GTTACGCCTTACGATTTCAATGATGATTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (154-244)

• Helix-hairpin-helix domain (HHH_5) (104-151)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (586-656)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-721)

• AAA domain (AAA_30) (340-546)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.938	99.753	0.498