Detailed information NTG0512786

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: I6G67_RS07625
• Genome accession: NZ_CP065666
• Coordinates: 1522375..1522995 (+)
• Length: 206 a.a.
• NCBI ID: WP_004696850.1
• Uniprot ID: A0A380U0I6
• Organism: Acinetobacter johnsonii strain FDAARGOS_910
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1517375..1527995

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G67_RS07590 (I6G67_07590)	kdsB	1517705..1518466 (+)	762	WP_004696838.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
I6G67_RS07595 (I6G67_07595)	-	1518486..1519469 (+)	984	WP_004696840.1	DNA polymerase III subunit delta' C-terminal domain-containing protein	-
I6G67_RS07600 (I6G67_07600)	-	1519484..1519825 (+)	342	WP_004696842.1	PilZ domain-containing protein	-
I6G67_RS07605 (I6G67_07605)	-	1519852..1520625 (+)	774	WP_004696843.1	TatD family hydrolase	-
I6G67_RS07610 (I6G67_07610)	-	1520671..1521285 (+)	615	WP_004696845.1	TetR/AcrR family transcriptional regulator	-
I6G67_RS07615 (I6G67_07615)	-	1521298..1521867 (+)	570	WP_004696846.1	type II secretion system protein	-
I6G67_RS07620 (I6G67_07620)	xcpV	1521965..1522378 (+)	414	WP_406935416.1	type II secretion system minor pseudopilin GspI	Machinery gene
I6G67_RS07625 (I6G67_07625)	xcpW	1522375..1522995 (+)	621	WP_004696850.1	type II secretion system minor pseudopilin GspJ	Machinery gene
I6G67_RS07630 (I6G67_07630)	gspK	1523074..1524024 (+)	951	WP_004696853.1	type II secretion system minor pseudopilin GspK	-
I6G67_RS07635 (I6G67_07635)	-	1524147..1524743 (+)	597	WP_004696854.1	6-carboxytetrahydropterin synthase	-
I6G67_RS07640 (I6G67_07640)	ung	1524785..1525498 (+)	714	WP_004696856.1	uracil-DNA glycosylase	-
I6G67_RS07645 (I6G67_07645)	-	1525495..1526616 (+)	1122	WP_004696858.1	enoyl-CoA hydratase/isomerase family protein	-
I6G67_RS07650 (I6G67_07650)	tadA	1526622..1527122 (+)	501	WP_004696859.1	tRNA adenosine(34) deaminase TadA	-
I6G67_RS07655 (I6G67_07655)	-	1527198..1527629 (+)	432	WP_004696860.1	SRPBCC family protein	-

Sequence

Protein

• Length: 206 a.a.
• Molecular weight: 23533.09 Da
• Isoelectric Point: 5.3491

>NTDB_id=512786 I6G67_RS07625 WP_004696850.1 1522375..1522995(+) (xcpW) [Acinetobacter johnsonii strain FDAARGOS_910]
MTKRSGFTLVELLVAIAIFAVLSALGWKVFDYLIKIKERNTQHEQRLGQLQEAYQQVLRDTVQIVPITANVAGQVQPAVM
LQNGQLAFSKTGVTDPLMQGIPPEERVEYIYKADEKKLYRYKYKNLNQTGNDQPETSVLLDSVDQFQIMLLNPNEMAQWP
EVALSENDVTQAKILPRGLKINLTVNEVSYEWVFSLLNTDFLKQKN

Nucleotide

• Length: 621 bp

>NTDB_id=512786 I6G67_RS07625 WP_004696850.1 1522375..1522995(+) (xcpW) [Acinetobacter johnsonii strain FDAARGOS_910]
ATGACAAAACGCTCAGGCTTTACTTTGGTTGAGTTATTGGTGGCAATCGCGATTTTTGCTGTGCTTTCAGCTTTGGGTTG
GAAGGTTTTTGATTATCTGATCAAGATTAAAGAGCGTAATACCCAACATGAACAGCGCTTAGGTCAGCTACAAGAAGCAT
ATCAACAAGTGTTGCGTGACACGGTGCAAATTGTACCAATTACTGCCAATGTTGCAGGGCAGGTTCAACCCGCAGTCATG
TTGCAAAATGGTCAGTTAGCCTTTAGTAAAACTGGAGTGACTGATCCTTTGATGCAAGGCATACCGCCTGAAGAGCGAGT
TGAATATATTTATAAAGCAGATGAAAAAAAACTGTACCGTTATAAATATAAAAATTTAAATCAAACAGGTAATGATCAAC
CTGAAACCAGTGTTCTACTTGATTCAGTTGATCAATTTCAAATTATGTTACTCAATCCTAATGAAATGGCACAATGGCCT
GAGGTGGCATTGAGTGAAAATGATGTGACTCAGGCAAAAATACTACCGCGCGGTTTAAAAATAAACCTCACTGTCAATGA
AGTGAGTTATGAATGGGTGTTTAGTTTATTAAATACAGACTTTTTAAAACAAAAAAATTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-25)

• Type II secretion system (T2SS), protein J (T2SSJ) (59-188)

3D structure

• AlphaFold DB: A0A380U0I6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	58.706	97.573	0.573