Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   STCNRZ1575_RS07920 Genome accession   NZ_CP065490
Coordinates   1522041..1523117 (-) Length   358 a.a.
NCBI ID   WP_011681549.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CNRZ1575     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1517041..1528117
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STCNRZ1575_RS07900 (STCNRZ1575_07870) - 1518153..1520219 (-) 2067 WP_260214194.1 sodium:proton antiporter -
  STCNRZ1575_RS07905 (STCNRZ1575_07875) - 1520228..1520470 (-) 243 WP_022096501.1 hypothetical protein -
  STCNRZ1575_RS07910 (STCNRZ1575_07880) - 1520467..1521015 (-) 549 WP_004197152.1 class I SAM-dependent methyltransferase -
  STCNRZ1575_RS07915 (STCNRZ1575_07885) - 1521012..1521956 (-) 945 WP_022096500.1 TIGR01212 family radical SAM protein -
  STCNRZ1575_RS07920 (STCNRZ1575_07890) sepM 1522041..1523117 (-) 1077 WP_011681549.1 SepM family pheromone-processing serine protease Regulator
  STCNRZ1575_RS07925 (STCNRZ1575_07895) coaD 1523095..1523592 (-) 498 WP_011681550.1 pantetheine-phosphate adenylyltransferase -
  STCNRZ1575_RS07930 (STCNRZ1575_07900) rsmD 1523626..1524225 (-) 600 Protein_1495 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  STCNRZ1575_RS07935 (STCNRZ1575_07905) trxB 1524316..1525269 (-) 954 WP_255136104.1 thioredoxin-disulfide reductase -
  STCNRZ1575_RS07940 (STCNRZ1575_07910) - 1525302..1525526 (-) 225 WP_002951743.1 DUF4059 family protein -
  STCNRZ1575_RS07945 (STCNRZ1575_07915) - 1525741..1526484 (-) 744 WP_260214195.1 amino acid ABC transporter ATP-binding protein -
  STCNRZ1575_RS07950 (STCNRZ1575_07920) - 1526484..1527230 (-) 747 WP_095559509.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 39172.02 Da        Isoelectric Point: 9.3888

>NTDB_id=510799 STCNRZ1575_RS07920 WP_011681549.1 1522041..1523117(-) (sepM) [Streptococcus thermophilus strain CNRZ1575]
MANKTKSKALLEKMWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVNKKADDSKGSYNFVAVAQTKAT
LALMLYAQFNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAVYQGLTLAGKEVSLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGNTFDNSTDMIKYVQGLKLGSKVKVTYMRDGKEKTATGKIIKIANGKNGIGIGLTDHTEIKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGAVGDIGGAYLKVKSAADSGADIFFVPNNLVTKEMKKADPD
AKTNYQEAKEAAEKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=510799 STCNRZ1575_RS07920 WP_011681549.1 1522041..1523117(-) (sepM) [Streptococcus thermophilus strain CNRZ1575]
GTGGCAAACAAGACAAAATCTAAAGCGCTATTAGAGAAAATGTGGCGTATTAAGTGGTGGTTATTAAGTATTTTTACGGT
ACTTTTCCTCCTTTTTGCCCTCTTTTTCCCGCTCAATAATTACTATGTGGAGCTTCCGGGTGGTGCTTTTGATACCAAGG
AAGTCTTGACAGTGAATAAGAAAGCTGATGATTCTAAGGGCTCCTATAATTTTGTGGCGGTGGCTCAAACCAAGGCGACT
TTGGCCTTGATGCTCTATGCTCAGTTTAATGATTTTGCAAAGCTTCAAACGGCTGAAGAGGCAACTGGAAATTACTCTGA
TGAAGATTTCATGCGCATCAACCAATTTTACATGGAGACTTCTCAAAACCAAGCGGTTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGTTAGTTTGGAGTATATGGGTGTCTATGTGCTTCAGGTTGCTGATGATTCTAGCTTCAAGGGTGTCCTCAAT
ATTGCTGATACGGTGACGGCTGTTAATGGTAATACCTTTGATAATTCTACTGACATGATTAAATACGTTCAAGGACTTAA
GCTGGGTTCAAAGGTCAAGGTCACTTATATGAGAGATGGCAAAGAAAAGACTGCTACTGGTAAGATTATTAAGATTGCCA
ATGGCAAAAATGGTATTGGTATCGGCCTAACGGACCATACTGAGATCAAGAGTCCTGAGAATGTTAAGTTTAAACTGGAT
GGTGTCGGTGGGCCAAGTGCTGGTCTTATGTTTACCTTGGCTATTTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGG
CCGCAAGATTGCTGGTACAGGAACTATTGAAAAAGATGGGGCTGTCGGTGATATCGGTGGGGCCTATCTCAAGGTGAAAT
CTGCGGCTGATAGTGGCGCAGACATTTTCTTCGTGCCAAATAATCTAGTAACTAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAGACTAATTATCAAGAGGCCAAGGAAGCTGCCGAGAAACTGGGGACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAATGA

Domains


Predicted by InterProScan.

(137-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

62.757

95.251

0.598