Detailed information NTG0510757

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: STCNRZ1575_RS01120
• Genome accession: NZ_CP065490
• Coordinates: 191402..192340 (+)
• Length: 312 a.a.
• NCBI ID: WP_011680672.1
• Uniprot ID: A0A0E2Q3C4
• Organism: Streptococcus thermophilus strain CNRZ1575
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 186402..197340

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STCNRZ1575_RS01100 (STCNRZ1575_01115)	-	188066..189070 (+)	1005	Protein_150	peptide ABC transporter substrate-binding protein	-
STCNRZ1575_RS01105 (STCNRZ1575_01120)	-	189081..189299 (+)	219	Protein_151	ABC transporter permease subunit	-
STCNRZ1575_RS01110 (STCNRZ1575_01125)	-	189310..190344 (+)	1035	Protein_152	ABC transporter permease	-
STCNRZ1575_RS01115 (STCNRZ1575_01130)	-	190358..191400 (+)	1043	Protein_153	ABC transporter ATP-binding protein	-
STCNRZ1575_RS01120 (STCNRZ1575_01135)	amiF	191402..192340 (+)	939	WP_011680672.1	ATP-binding cassette domain-containing protein	Regulator
STCNRZ1575_RS01125	-	192562..192750 (+)	189	WP_011225379.1	hypothetical protein	-
STCNRZ1575_RS01130 (STCNRZ1575_01145)	hslO	192897..193763 (+)	867	WP_002949275.1	Hsp33 family molecular chaperone HslO	-
STCNRZ1575_RS01135 (STCNRZ1575_01150)	dusB	193756..194733 (+)	978	WP_011680674.1	tRNA dihydrouridine synthase DusB	-
STCNRZ1575_RS01140 (STCNRZ1575_01155)	-	194962..196230 (+)	1269	WP_011225384.1	peptidase	-
STCNRZ1575_RS01145 (STCNRZ1575_01160)	-	196336..196779 (+)	444	WP_014607905.1	zinc-dependent MarR family transcriptional regulator	-

Sequence

Protein

• Length: 312 a.a.
• Molecular weight: 35353.03 Da
• Isoelectric Point: 6.1917

>NTDB_id=510757 STCNRZ1575_RS01120 WP_011680672.1 191402..192340(+) (amiF) [Streptococcus thermophilus strain CNRZ1575]
MTQERKKLVELKNVSLTFNKGKSNEVEAIDDVSFDIYEGEIFGLVGESGSGKTTIGRFVLKLSDIDSGTVTFSGNEISSL
KGKDLHDFRKIDQMIFQDPQSSLNGRMKIRDIIAEGIDIHKLAKSKEEREAKVKELIDLVGLNEDHLSRYPHEFSGGQRQ
RIGIARALAVNHHFIVADEPISALDVSIQAQVVNLMQKLQHEQGLTYLFIAHDLSIVKYISDRIGAMHWGKLLEVGPADE
IYHNPIHPYTKSLLSAIPEPDPERERKRQHLIYDSSIENDGENRQMYEIRPGHFVYTTVAEAKNYKEEVKSN

Nucleotide

• Length: 939 bp

>NTDB_id=510757 STCNRZ1575_RS01120 WP_011680672.1 191402..192340(+) (amiF) [Streptococcus thermophilus strain CNRZ1575]
ATGACACAAGAACGTAAAAAGTTAGTAGAACTAAAAAATGTGTCTCTAACTTTTAATAAAGGAAAATCAAACGAGGTTGA
GGCTATTGATGACGTTAGCTTTGATATCTATGAGGGCGAAATTTTTGGACTAGTTGGAGAATCTGGATCAGGTAAAACAA
CCATTGGGCGATTTGTTTTAAAACTTTCTGATATTGATTCGGGTACTGTTACCTTTTCAGGTAATGAGATATCAAGTTTA
AAAGGGAAAGATCTTCATGATTTCCGTAAGATAGATCAGATGATCTTTCAAGATCCTCAATCTAGTCTTAATGGACGCAT
GAAAATCCGTGATATTATTGCTGAAGGCATTGATATTCATAAATTGGCTAAATCTAAGGAAGAGCGTGAAGCTAAGGTTA
AAGAACTCATTGATTTGGTAGGGTTAAATGAAGATCACCTATCAAGATATCCTCATGAGTTTTCTGGTGGTCAACGTCAA
AGGATTGGTATTGCGCGTGCTTTAGCGGTTAATCATCATTTTATTGTAGCAGACGAACCGATTTCTGCTTTGGATGTTTC
TATTCAAGCACAAGTGGTTAATTTGATGCAGAAGTTGCAACATGAACAGGGGTTAACTTATTTGTTTATTGCCCATGACC
TATCGATTGTTAAATATATATCCGATCGTATTGGTGCAATGCATTGGGGTAAACTTCTTGAAGTGGGACCAGCAGATGAG
ATCTATCATAACCCGATTCATCCTTATACAAAGAGTCTATTATCTGCAATTCCAGAACCAGATCCAGAAAGAGAGCGTAA
GCGTCAGCATTTGATTTACGATTCCTCTATTGAAAATGATGGGGAAAATAGACAAATGTATGAAATCCGACCAGGGCATT
TTGTTTATACTACAGTAGCAGAGGCTAAAAATTATAAAGAAGAAGTCAAGTCTAATTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (30-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-265)

3D structure

• AlphaFold DB: A0A0E2Q3C4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	53.115	97.756	0.519
amiF	Streptococcus thermophilus LMG 18311	52.787	97.756	0.516
amiF	Streptococcus salivarius strain HSISS4	52.459	97.756	0.513