Detailed information NTG0510193

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: ST90729_RS05615
• Genome accession: NZ_CP065480
• Coordinates: 1080526..1081407 (-)
• Length: 293 a.a.
• NCBI ID: WP_002953146.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain 90729
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1075526..1086407

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ST90729_RS05590 (ST90729_05600)	vicR	1076230..1076937 (-)	708	WP_173940375.1	response regulator YycF	Regulator
ST90729_RS05595 (ST90729_05605)	-	1077464..1078231 (+)	768	WP_022096757.1	amino acid ABC transporter ATP-binding protein	-
ST90729_RS05600 (ST90729_05610)	-	1078243..1079076 (+)	834	WP_347116222.1	transporter substrate-binding domain-containing protein	-
ST90729_RS05605 (ST90729_05615)	-	1079094..1079792 (+)	699	WP_347116227.1	amino acid ABC transporter permease	-
ST90729_RS05610 (ST90729_05620)	-	1079804..1080454 (+)	651	WP_011226088.1	amino acid ABC transporter permease	-
ST90729_RS05615 (ST90729_05625)	endA	1080526..1081407 (-)	882	WP_002953146.1	DNA/RNA non-specific endonuclease	Machinery gene
ST90729_RS05620 (ST90729_05630)	-	1081469..1081657 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
ST90729_RS05625 (ST90729_05635)	murA	1081659..1082930 (-)	1272	WP_041827046.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
ST90729_RS05630 (ST90729_05640)	-	1083000..1083236 (-)	237	WP_002946959.1	DUF1146 family protein	-
ST90729_RS05635 (ST90729_05645)	galE	1083424..1084437 (-)	1014	WP_002946961.1	UDP-glucose 4-epimerase GalE	-
ST90729_RS05640 (ST90729_05650)	-	1084452..1084907 (-)	456	WP_347116231.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.54 Da
• Isoelectric Point: 10.2316

>NTDB_id=510193 ST90729_RS05615 WP_002953146.1 1080526..1081407(-) (endA) [Streptococcus thermophilus strain 90729]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRKVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=510193 ST90729_RS05615 WP_002953146.1 1080526..1081407(-) (endA) [Streptococcus thermophilus strain 90729]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGAAAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594