Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   SAIN_RS03290 Genome accession   NC_022244
Coordinates   672381..674150 (+) Length   589 a.a.
NCBI ID   WP_021001515.1    Uniprot ID   -
Organism   Streptococcus anginosus C1051     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 667381..679150
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAIN_RS03265 (SAIN_0639) - 667681..667911 (+) 231 WP_041784005.1 DUF1146 family protein -
  SAIN_RS03270 (SAIN_0640) murA 667950..669230 (+) 1281 WP_021001512.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  SAIN_RS03275 - 669223..669399 (+) 177 WP_041784006.1 DNA-directed RNA polymerase subunit beta -
  SAIN_RS03280 (SAIN_0641) endA 669500..670345 (+) 846 WP_021001513.1 DNA/RNA non-specific endonuclease Machinery gene
  SAIN_RS03285 (SAIN_0642) - 670635..672371 (+) 1737 WP_021001514.1 ABC transporter ATP-binding protein -
  SAIN_RS03290 (SAIN_0643) rcrQ 672381..674150 (+) 1770 WP_021001515.1 ABC transporter ATP-binding protein Regulator
  SAIN_RS03295 (SAIN_0644) - 674565..675566 (-) 1002 WP_021001516.1 YdcF family protein -
  SAIN_RS03305 (SAIN_0646) - 676299..676679 (+) 381 WP_021001517.1 CidA/LrgA family protein -
  SAIN_RS03310 - 676672..677367 (+) 696 WP_003037392.1 LrgB family protein -
  SAIN_RS03315 (SAIN_0647) - 677485..677997 (+) 513 WP_003025236.1 adenine phosphoribosyltransferase -
  SAIN_RS03320 (SAIN_0648) metA 678097..679041 (+) 945 WP_021001518.1 homoserine O-acetyltransferase MetA -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 66303.56 Da        Isoelectric Point: 5.3681

>NTDB_id=50892 SAIN_RS03290 WP_021001515.1 672381..674150(+) (rcrQ) [Streptococcus anginosus C1051]
MKQHSFMRLWSYLKVYKLSVILAIFLKVVSIVMSVLEPFVLGLAITELTRNVLDIAKGVEGASINTTYVFWVMALYLLRG
LFYEIGAYYSNYFMTNAVQNTVRDMRNELSSKINQIPVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQVINGVLTLTL
VICMMLYLNFQLALIVIVSIPLTYFGANFILKKSQPYFKKQADALGAMNGFVQENLSGFNVLKLYGREETSSEDFREITQ
NLQEVGFKASFISGLMMPILNAVSDLTYLIVAVVGGLQVISGQLTIGNMQAFVQYVWQVNQPIQNLTQLAGQLQSAKSSL
DRIFQVLDEPDEVTDVKEWLEHDLTGQVSFKHVDFQYVENKPLIRDFNLEVKPGEMVAIVGPTGAGKTTLINLLMRFYDV
TAGSISVDGHDIRNLSRQEYHKQFGMVLQDAWLYEGTVKENLRFGNLNATDEEIVEAAKAANVDHFIRTLPGGYNMEMNQ
ESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKNLMQGRTSFVIAHRLSTIQEADKILVLKDGQI
IEQGTHESLLADKGFYYDLYTSQFAKKEA

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=50892 SAIN_RS03290 WP_021001515.1 672381..674150(+) (rcrQ) [Streptococcus anginosus C1051]
ATGAAACAACATAGTTTTATGCGCTTGTGGAGTTATTTAAAAGTTTATAAACTCTCAGTAATCCTTGCTATCTTTTTGAA
GGTGGTGAGTATTGTGATGAGCGTGCTAGAGCCTTTTGTACTTGGTCTTGCTATTACAGAATTGACACGAAATGTGCTGG
ATATAGCAAAAGGAGTCGAAGGCGCCAGTATAAACACAACATATGTCTTTTGGGTAATGGCACTTTACCTTTTGCGTGGT
TTGTTCTATGAAATTGGGGCTTACTATTCGAATTATTTTATGACCAATGCAGTGCAAAATACAGTACGTGACATGCGCAA
TGAGTTGAGTTCTAAAATCAATCAAATTCCAGTTTCTTATTTTGATAAACATCAATTTGGAGATTTGCTAGGACGTTTTA
CCAGCGACGTAGAAACTGTTTCTAATGCGCTTCAGCAATCTTTTCTGCAAGTGATTAATGGTGTTCTGACGCTCACTTTA
GTTATTTGCATGATGTTATACCTCAATTTCCAATTAGCTCTGATTGTCATTGTCAGCATTCCTTTGACCTACTTTGGGGC
GAATTTTATCTTAAAGAAATCGCAGCCGTATTTTAAAAAGCAAGCAGATGCGCTGGGTGCTATGAACGGATTTGTGCAGG
AAAATCTGAGCGGTTTTAATGTGCTGAAACTCTATGGCCGTGAAGAAACATCTTCAGAAGATTTTCGCGAAATCACGCAA
AATCTCCAAGAAGTTGGCTTCAAAGCTAGCTTTATTTCGGGTTTGATGATGCCAATTTTGAACGCCGTTTCAGATTTGAC
CTATTTGATTGTAGCGGTTGTTGGCGGTCTGCAAGTCATTTCTGGACAATTAACGATTGGGAACATGCAAGCATTTGTAC
AATATGTGTGGCAAGTGAACCAACCAATCCAAAACTTAACGCAACTGGCTGGGCAATTGCAGAGTGCTAAGTCTTCGCTG
GATCGTATCTTCCAAGTTTTGGATGAACCAGACGAAGTAACAGATGTGAAAGAGTGGCTGGAGCATGATTTGACAGGTCA
GGTTAGCTTCAAGCATGTTGACTTTCAATACGTGGAAAACAAACCGCTCATTCGAGACTTTAACTTAGAAGTTAAGCCGG
GCGAAATGGTAGCGATTGTCGGTCCAACGGGTGCCGGAAAGACCACCCTCATCAATCTGCTCATGCGTTTTTACGATGTA
ACTGCTGGTTCGATTTCTGTCGATGGTCACGATATTCGTAACTTATCACGACAAGAATACCACAAACAATTTGGAATGGT
CTTGCAAGATGCTTGGCTTTATGAAGGAACAGTCAAAGAAAACTTGCGTTTTGGAAATCTGAATGCGACAGATGAAGAGA
TTGTGGAAGCTGCCAAAGCGGCTAATGTCGATCATTTCATTCGGACGCTTCCAGGTGGTTATAATATGGAAATGAATCAG
GAATCCAGCAATATTTCGCTAGGACAAAAACAATTGCTGACCATTGCGCGAGCATTATTAGCCGATCCAAAAATCTTGAT
TTTGGATGAAGCAACCTCGTCCGTTGATACACGCCTAGAGCTCTTGATTCAAAAAGCGATGAAGAACCTCATGCAAGGAC
GAACAAGCTTTGTCATTGCTCACCGCTTATCGACGATTCAAGAGGCGGACAAGATTTTGGTTCTCAAAGACGGGCAAATC
ATTGAGCAAGGAACTCACGAATCGCTTTTAGCTGATAAAGGTTTCTATTACGACTTATATACAAGTCAGTTTGCTAAGAA
AGAAGCCTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(20-302)

ABC transporter (ABC_tran)

(365-513)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

44.276

100

0.447

Multiple sequence alignment