Detailed information    

insolico Bioinformatically predicted

Overview

Name   proC   Type   Machinery gene
Locus tag   I5Q61_RS01620 Genome accession   NZ_CP065357
Coordinates   322550..323254 (-) Length   234 a.a.
NCBI ID   WP_066778869.1    Uniprot ID   A0A6A7JRL2
Organism   Campylobacter hepaticus strain UF2019SK1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 317550..328254
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I5Q61_RS01585 (I5Q61_01585) - 318425..319111 (+) 687 WP_066778760.1 nuclease -
  I5Q61_RS01590 (I5Q61_01590) thiD 319108..319920 (+) 813 WP_066778763.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  I5Q61_RS01595 (I5Q61_01595) thiE 319910..320542 (+) 633 WP_066778764.1 thiamine phosphate synthase -
  I5Q61_RS01600 (I5Q61_01600) - 320520..321149 (+) 630 WP_066778766.1 uroporphyrinogen-III synthase -
  I5Q61_RS01605 (I5Q61_01605) - 321146..321598 (-) 453 WP_066778768.1 hypothetical protein -
  I5Q61_RS01610 (I5Q61_01610) - 321595..322254 (-) 660 WP_066778770.1 hypothetical protein -
  I5Q61_RS01615 (I5Q61_01615) ctsT 322251..322553 (-) 303 WP_066778773.1 transformation system protein Machinery gene
  I5Q61_RS01620 (I5Q61_01620) proC 322550..323254 (-) 705 WP_066778869.1 pyrroline-5-carboxylate reductase Machinery gene
  I5Q61_RS01625 (I5Q61_01625) fliW 323280..323669 (-) 390 WP_066778774.1 flagellar assembly protein FliW -
  I5Q61_RS01630 (I5Q61_01630) bamD 323834..324481 (+) 648 WP_066778777.1 outer membrane protein assembly factor BamD -
  I5Q61_RS01635 (I5Q61_01635) lon 324495..326870 (+) 2376 WP_066778780.1 endopeptidase La -
  I5Q61_RS01640 (I5Q61_01640) rpsR 326913..327173 (-) 261 WP_066778782.1 30S ribosomal protein S18 -
  I5Q61_RS01645 (I5Q61_01645) - 327185..327724 (-) 540 WP_066778784.1 single-stranded DNA-binding protein -
  I5Q61_RS01650 (I5Q61_01650) rpsF 327733..328110 (-) 378 WP_066778787.1 30S ribosomal protein S6 -

Sequence

Protein


Download         Length: 234 a.a.        Molecular weight: 25875.04 Da        Isoelectric Point: 7.1876

>NTDB_id=508818 I5Q61_RS01620 WP_066778869.1 322550..323254(-) (proC) [Campylobacter hepaticus strain UF2019SK1]
MAKALAYGLKNDYEIYIVGRNLEKLQILAQEGFKILLYQDFNIQDKDIILAFKPYALENISKCLKGQARILISVLANTDF
EKLQVIHAQNYVRIMPNIAAKYQASTTPYILKNSLFNNEILEILNTFGLAYELENEEQMGAAMAISGCAPAFLALVAESI
ANAGVCEGLPKELSLNLTRSLFQSSSTLLKHEHPAIIRENICSPSGVTIKGIKVLEQKGVRGSFFEAINASNTK

Nucleotide


Download         Length: 705 bp        

>NTDB_id=508818 I5Q61_RS01620 WP_066778869.1 322550..323254(-) (proC) [Campylobacter hepaticus strain UF2019SK1]
ATGGCAAAAGCTTTAGCCTATGGATTAAAAAATGATTATGAAATCTACATAGTAGGAAGAAATTTAGAGAAACTTCAAAT
ATTAGCCCAAGAGGGTTTTAAAATTTTACTTTATCAAGATTTTAATATACAAGATAAAGACATAATTTTAGCTTTTAAAC
CCTATGCTTTAGAAAATATATCTAAGTGTTTAAAAGGTCAAGCACGCATTTTAATTTCTGTTTTAGCTAATACAGATTTT
GAAAAACTACAAGTCATTCATGCTCAAAATTATGTAAGAATCATGCCTAATATAGCGGCCAAATATCAAGCTTCAACCAC
ACCTTATATACTTAAAAATTCTCTTTTTAATAATGAAATTTTAGAAATTTTAAATACTTTTGGTTTAGCCTATGAATTAG
AAAATGAAGAACAAATGGGTGCTGCTATGGCAATTAGTGGTTGCGCTCCCGCTTTTTTAGCTCTCGTAGCAGAAAGTATT
GCTAATGCTGGAGTTTGCGAAGGTTTACCCAAAGAACTTAGCTTAAATCTTACTCGGTCTTTATTTCAAAGTTCAAGTAC
CTTGCTTAAACATGAACATCCAGCCATTATTAGGGAAAATATTTGCTCTCCTAGTGGTGTTACCATAAAAGGTATTAAAG
TACTTGAACAAAAGGGGGTTCGTGGAAGTTTTTTTGAAGCTATAAATGCTAGCAACACTAAATGA

Domains

Predicted by InterproScan.

Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer)

(136-233)

NADP oxidoreductase coenzyme F420-dependent (F420_oxidored)

(1-76)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6A7JRL2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  proC Campylobacter jejuni subsp. jejuni 81-176

82.051

100

0.821