Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   I5Q61_RS00450 Genome accession   NZ_CP065357
Coordinates   83966..84493 (+) Length   175 a.a.
NCBI ID   WP_066776442.1    Uniprot ID   A0A6A7JQR5
Organism   Campylobacter hepaticus strain UF2019SK1     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 78966..89493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I5Q61_RS00425 (I5Q61_00425) - 79424..79759 (+) 336 WP_066775987.1 hypothetical protein -
  I5Q61_RS00430 (I5Q61_00430) - 79770..80495 (+) 726 WP_066775990.1 phosphatidate cytidylyltransferase -
  I5Q61_RS00435 (I5Q61_00435) dxr 80492..81562 (+) 1071 WP_066775992.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  I5Q61_RS00440 (I5Q61_00440) - 81564..82958 (+) 1395 WP_066775997.1 M99 family carboxypeptidase catalytic domain-containing protein -
  I5Q61_RS00445 (I5Q61_00445) tsaD 82955..83962 (+) 1008 WP_066775999.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  I5Q61_RS00450 (I5Q61_00450) ctsG 83966..84493 (+) 528 WP_066776442.1 type II secretion system protein Machinery gene
  I5Q61_RS00455 (I5Q61_00455) - 84480..85727 (+) 1248 WP_196913971.1 DUF2920 family protein -
  I5Q61_RS00460 (I5Q61_00460) - 85736..87559 (+) 1824 WP_066776004.1 motility associated factor glycosyltransferase family protein -
  I5Q61_RS00465 (I5Q61_00465) - 87643..89364 (+) 1722 WP_066776007.1 flagellin A -

Sequence

Protein


Download         Length: 175 a.a.        Molecular weight: 19348.26 Da        Isoelectric Point: 5.3253

>NTDB_id=508811 I5Q61_RS00450 WP_066776442.1 83966..84493(+) (ctsG) [Campylobacter hepaticus strain UF2019SK1]
MKKAFTILELVFVVVILGILLAFALPKFSSSKNEAELSRSLNNLKTLINDISIYALKNDTLASMSMMSNVDEVENVDLRH
LNGVKEVGFGVGDDRQCLKLVFIDRADFVLMGISSNEESKNAIINKAGGTRENFDDIDFTSTSSSRICVALSKSENFKNL
ARKTYLLIGELNDSK

Nucleotide


Download         Length: 528 bp        

>NTDB_id=508811 I5Q61_RS00450 WP_066776442.1 83966..84493(+) (ctsG) [Campylobacter hepaticus strain UF2019SK1]
ATGAAAAAAGCTTTTACTATACTTGAACTTGTTTTTGTGGTGGTGATTTTGGGGATTTTGCTTGCTTTTGCTTTACCTAA
ATTTAGTTCTAGTAAAAATGAAGCTGAACTGAGTAGATCGTTAAATAATCTTAAAACTTTGATCAATGATATAAGTATTT
ATGCTTTAAAAAATGATACTTTGGCTTCTATGAGTATGATGAGCAATGTTGATGAAGTTGAAAATGTTGATCTTAGGCAT
TTAAATGGGGTTAAAGAAGTTGGTTTTGGTGTGGGTGATGATAGGCAGTGTTTAAAACTTGTTTTTATTGATAGGGCTGA
TTTTGTTTTGATGGGAATTTCAAGCAATGAAGAGAGTAAAAATGCTATTATTAATAAAGCTGGTGGTACTAGGGAGAATT
TTGATGATATTGATTTTACTAGCACTTCAAGTAGTAGAATTTGTGTGGCTTTAAGTAAGAGTGAAAATTTTAAAAATTTG
GCTAGAAAAACTTATCTTTTAATAGGGGAGCTTAATGATAGTAAATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6A7JQR5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

71.006

96.571

0.686