Detailed information    

insolico Bioinformatically predicted

Overview

Name   scnK   Type   Regulator
Locus tag   SMULJ23_RS04655 Genome accession   NC_017768
Coordinates   949555..950862 (+) Length   435 a.a.
NCBI ID   WP_002270206.1    Uniprot ID   -
Organism   Streptococcus mutans LJ23     
Function   regulate comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 944555..955862
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMULJ23_RS04625 (SMULJ23_0888) - 944596..944829 (+) 234 WP_002262193.1 DUF1858 domain-containing protein -
  SMULJ23_RS04630 (SMULJ23_0889) - 944829..946190 (+) 1362 WP_014677976.1 DUF438 domain-containing protein -
  SMULJ23_RS04635 (SMULJ23_0890) - 946317..947045 (-) 729 WP_014677977.1 ABC transporter permease -
  SMULJ23_RS04640 (SMULJ23_0891) - 947042..947782 (-) 741 WP_002265501.1 ABC transporter permease -
  SMULJ23_RS04645 (SMULJ23_0892) - 947782..948690 (-) 909 WP_002286912.1 ABC transporter ATP-binding protein -
  SMULJ23_RS04650 (SMULJ23_0894) scnR 948865..949554 (+) 690 WP_002268159.1 response regulator transcription factor Regulator
  SMULJ23_RS04655 (SMULJ23_0895) scnK 949555..950862 (+) 1308 WP_002270206.1 HAMP domain-containing sensor histidine kinase Regulator
  SMULJ23_RS04660 (SMULJ23_0896) truB 950955..951836 (+) 882 WP_002274217.1 tRNA pseudouridine(55) synthase TruB -
  SMULJ23_RS04665 (SMULJ23_0897) - 951867..952787 (+) 921 WP_002262201.1 bifunctional riboflavin kinase/FAD synthetase -
  SMULJ23_RS04670 (SMULJ23_0898) spx 952848..953261 (+) 414 WP_002263835.1 transcriptional regulator Spx -
  SMULJ23_RS04675 (SMULJ23_0899) - 953254..953532 (+) 279 WP_002265496.1 UPF0223 family protein -
  SMULJ23_RS04680 (SMULJ23_0900) - 953522..954280 (+) 759 WP_002262204.1 inositol monophosphatase family protein -
  SMULJ23_RS04685 (SMULJ23_0901) - 954344..955648 (+) 1305 WP_002266789.1 RsmB/NOP family class I SAM-dependent RNA methyltransferase -

Sequence

Protein


Download         Length: 435 a.a.        Molecular weight: 50059.02 Da        Isoelectric Point: 9.6900

>NTDB_id=50758 SMULJ23_RS04655 WP_002270206.1 949555..950862(+) (scnK) [Streptococcus mutans LJ23]
MDTVKFFTKLLTKYVLLVFALIVGVIFVYGLVFLTYLNYYGKEKPELVYTKIAQSSQQDAFNISKRSQKEMDKQKTWAMV
LNQDGQIVQSYRLPQQLKRHYTNADMVKFSRWYLDDYPVFSYVRGQQILVFGYPKKYSLAKFNFYLNTQFIKNFLHLGFV
FLGIIFLFIFVLFSRSKLRIKKEIEPIVSALTFLSQGQSAALNEKGNLSEIKTALNETSHILEESNMMKEQWIRGVSHDL
RNPLMLISGYTSQLEQQYGHGKQTEQIENQIQNMKEMISNLNLSYLLDNQKRHSKFSSLDLAVVLRSVIADILNNYETVI
LHFDLPAEAVLVKGDATLLERAFRNLLLNSIRHSGSNQIDLTYQLFDNKVIIIIADKGTITAQKIVELNQKSTNYESHGM
GTVITKQIIKLHQGETVFSDNHPGLKVTIVLPCNG

Nucleotide


Download         Length: 1308 bp        

>NTDB_id=50758 SMULJ23_RS04655 WP_002270206.1 949555..950862(+) (scnK) [Streptococcus mutans LJ23]
ATGGATACCGTTAAATTTTTTACGAAGTTATTGACCAAGTATGTTCTATTAGTATTTGCCTTAATTGTAGGAGTTATTTT
TGTTTATGGCTTGGTTTTCTTAACCTATCTTAATTATTATGGAAAGGAAAAACCAGAGCTAGTTTACACCAAAATCGCTC
AATCGAGTCAACAAGATGCGTTCAATATTAGTAAAAGAAGTCAAAAAGAAATGGATAAACAAAAGACTTGGGCTATGGTA
TTAAATCAAGATGGTCAGATCGTCCAATCTTATCGTTTACCTCAACAGCTCAAAAGACATTACACCAATGCTGATATGGT
GAAATTTTCGCGCTGGTATTTAGATGATTATCCTGTTTTTTCCTATGTACGTGGTCAGCAGATTTTAGTTTTTGGCTACC
CTAAAAAGTATTCCCTAGCAAAGTTTAATTTTTATCTGAATACGCAATTTATTAAGAATTTTCTTCATTTAGGGTTTGTT
TTCTTAGGCATCATCTTTTTATTTATCTTTGTTCTTTTTAGCCGTTCAAAGCTGCGCATTAAAAAGGAAATAGAGCCGAT
TGTCTCTGCGCTCACTTTCCTGTCGCAAGGTCAAAGTGCTGCTCTTAATGAAAAAGGCAATCTTTCTGAAATTAAGACAG
CTCTCAATGAAACTTCTCATATTTTAGAAGAAAGTAATATGATGAAAGAACAGTGGATTAGAGGAGTCAGTCACGATTTG
CGCAACCCGCTGATGCTGATTTCAGGCTACACCAGTCAATTGGAACAACAATATGGTCATGGAAAGCAAACGGAGCAGAT
TGAAAATCAGATTCAAAATATGAAAGAAATGATTTCTAATCTCAATTTGAGCTACCTGTTGGATAATCAAAAGCGTCATT
CCAAATTTTCAAGCCTTGATTTAGCTGTTGTTCTGCGATCCGTAATTGCTGATATTCTAAATAATTATGAAACAGTTATA
CTTCATTTTGATTTACCTGCAGAGGCGGTATTGGTAAAGGGTGATGCCACTTTATTAGAAAGGGCTTTTAGAAATCTTCT
GCTCAATAGTATTAGGCATAGTGGCTCTAATCAGATCGATTTGACTTATCAATTATTTGATAATAAAGTGATTATTATCA
TTGCAGATAAGGGAACTATTACAGCTCAGAAAATTGTAGAACTAAATCAAAAATCAACTAATTATGAGTCGCATGGCATG
GGCACCGTTATCACTAAGCAAATCATAAAACTTCATCAAGGTGAGACTGTCTTTTCAGATAATCATCCAGGTTTGAAAGT
GACGATTGTTTTGCCCTGTAACGGATGA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(228-282)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(334-432)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  scnK Streptococcus mutans UA159

98.845

99.54

0.984

Multiple sequence alignment