Detailed information NTG0506621

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: I2437_RS08190
• Genome accession: NZ_CP065061
• Coordinates: 1741920..1742855 (-)
• Length: 311 a.a.
• NCBI ID: WP_012514940.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain SEZ33
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1736920..1747855

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I2437_RS08165 (IEMOCGPF_01633)	tsaD	1736958..1737974 (-)	1017	WP_012678539.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
I2437_RS08170 (IEMOCGPF_01634)	rimI	1737964..1738389 (-)	426	WP_014622281.1	ribosomal protein S18-alanine N-acetyltransferase	-
I2437_RS08175 (IEMOCGPF_01635)	tsaB	1738392..1739090 (-)	699	WP_206157814.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
I2437_RS08180 (IEMOCGPF_01636)	-	1739376..1739606 (+)	231	WP_012678542.1	DNA-dependent RNA polymerase subunit epsilon	-
I2437_RS08185 (IEMOCGPF_01637)	rnjA	1739608..1741290 (+)	1683	WP_012514941.1	ribonuclease J1	-
I2437_RS08190 (IEMOCGPF_01638)	amiF	1741920..1742855 (-)	936	WP_012514940.1	ATP-binding cassette domain-containing protein	Regulator
I2437_RS08195 (IEMOCGPF_01639)	oppD	1742855..1743901 (-)	1047	WP_206157815.1	ABC transporter ATP-binding protein	Regulator
I2437_RS08200 (IEMOCGPF_01640)	-	1743914..1744945 (-)	1032	WP_012678545.1	ABC transporter permease	-
I2437_RS08205 (IEMOCGPF_01641)	-	1744955..1745869 (-)	915	WP_164437536.1	ABC transporter permease	-
I2437_RS08210 (IEMOCGPF_01642)	-	1746036..1747694 (-)	1659	WP_206152170.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 35067.17 Da
• Isoelectric Point: 8.3565

>NTDB_id=506621 I2437_RS08190 WP_012514940.1 1741920..1742855(-) (amiF) [Streptococcus equi subsp. zooepidemicus strain SEZ33]
MTEARKKLIEVKNVSLTFNKGKKNEVKAIDRLSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDISDGEIIFNGENVSQL
KGKKLHSFRKHAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREARVQELLKLVGLNQDHLTRYPHEFSGGQRQ
RIGIARALAVKPTFIIADEPISALDVSIQAQVVSLMQQLQKKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDE
VYNHPIHPYTKSLISAIPEPDPEKERRRIAEVYDPSQELDGQERQMYEITPGHFVLATQAEADQYRAERGL

Nucleotide

• Length: 936 bp

>NTDB_id=506621 I2437_RS08190 WP_012514940.1 1741920..1742855(-) (amiF) [Streptococcus equi subsp. zooepidemicus strain SEZ33]
ATGACAGAAGCTCGTAAAAAATTAATCGAAGTAAAGAATGTTTCCTTAACCTTTAACAAGGGGAAGAAAAACGAGGTTAA
GGCTATTGATCGCCTTAGCTTTGACATTTATGAGGGGGAAGTATTTGGCCTTGTTGGGGAATCAGGCTCAGGCAAGACGA
CAGTTGGTCGAGCTATTTTGAAATTGTATGATATTAGTGATGGCGAGATTATCTTTAATGGAGAAAACGTCTCCCAATTA
AAGGGGAAAAAGCTGCATAGCTTTCGTAAGCATGCGCAAATGATCTTCCAAGATCCTCAGGCTAGTCTGAACGGTCGCAT
GAAAATCAGAGACATTGTTGCAGAGGGCTTAGACATTCATGGCTTGACAGCCTCAAAGGCAGAGCGTGAGGCAAGAGTCC
AAGAGCTGTTAAAGCTTGTTGGGCTTAATCAGGATCATTTGACGCGGTACCCACATGAATTTTCTGGTGGCCAACGCCAG
CGGATTGGCATTGCGCGTGCCCTGGCTGTGAAGCCGACCTTTATTATCGCAGATGAGCCGATTTCAGCGCTTGATGTGTC
GATTCAAGCACAGGTAGTGAGTCTCATGCAGCAATTGCAAAAGAAGCGCGGCTTGACCTATCTCTTTATCGCACACGATT
TGTCTATGGTCAAATACATTTCAGACCGTATTGGTGTGATGCATTGGGGAAAAATGCTTGAGATTGGAACATCTGATGAG
GTTTACAATCACCCGATTCACCCTTATACGAAAAGCTTGATCTCGGCCATTCCTGAGCCGGATCCTGAAAAGGAGCGTAG
GCGCATTGCAGAGGTTTATGATCCTAGTCAAGAGCTAGATGGCCAAGAGCGGCAAATGTATGAAATCACTCCTGGGCATT
TTGTCTTAGCGACGCAGGCCGAAGCCGATCAGTATCGAGCAGAGCGTGGCCTCTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (30-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	53.922	98.392	0.531
amiF	Streptococcus thermophilus LMG 18311	53.595	98.392	0.527
amiF	Streptococcus salivarius strain HSISS4	53.268	98.392	0.524