Detailed information NTG0506040

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: I6L86_RS05740
• Genome accession: NZ_CP077259
• Coordinates: 1193114..1194385 (-)
• Length: 423 a.a.
• NCBI ID: WP_001113232.1
• Uniprot ID: A0A2I1UDS1
• Organism: Streptococcus mitis strain FDAARGOS 1456
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1188114..1199385

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6L86_RS05715 (I6L86_05715)	-	1189244..1190533 (+)	1290	WP_001062781.1	membrane protein	-
I6L86_RS05720 (I6L86_05720)	-	1190543..1191631 (+)	1089	WP_001055024.1	AI-2E family transporter	-
I6L86_RS05730 (I6L86_05730)	-	1191907..1192422 (-)	516	WP_000672740.1	DUF308 domain-containing protein	-
I6L86_RS05740 (I6L86_05740)	rarA	1193114..1194385 (-)	1272	WP_001113232.1	replication-associated recombination protein A	Machinery gene
I6L86_RS05745 (I6L86_05745)	-	1194501..1194971 (+)	471	WP_000257127.1	DUF3013 family protein	-
I6L86_RS05750 (I6L86_05750)	-	1194990..1196057 (+)	1068	WP_000719487.1	M50 family metallopeptidase	-
I6L86_RS05755 (I6L86_05755)	-	1196059..1196487 (+)	429	WP_000402088.1	NUDIX hydrolase	-
I6L86_RS05760 (I6L86_05760)	prmA	1196625..1197575 (+)	951	WP_000451175.1	50S ribosomal protein L11 methyltransferase	-
I6L86_RS05765 (I6L86_05765)	-	1197577..1198320 (+)	744	WP_001188174.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 46969.48 Da
• Isoelectric Point: 6.2424

>NTDB_id=506040 I6L86_RS05740 WP_001113232.1 1193114..1194385(-) (rarA) [Streptococcus mitis strain FDAARGOS 1456]
MPDNLALRMRPKTIDQVIGQEHLVGQGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATVDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLESGLVIMIGATTENPFFSVTPAIRSRVQIFELEPLSNQDVKEALQ
IALSNPERGFDFPVELDEDALDFIATSTNGDLRSAFNSLDLAVLSTPENDKGIRHITLDIMENSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVDASLHYAARLIEAGDLPSLARRLTVIAYEDIGLANPEAQIHTVTALDAAQKIGFPEARILIANVV
IDLALSPKSNSAYVAMDKALADLKTSGHLPIPRHLRDGHYSGSKELGNAQDYLYPHNYPGNWVKQDYLPEKIRNHHYFQA
EDTGKYERALAQRKEAIDRLRKI

Nucleotide

• Length: 1272 bp

>NTDB_id=506040 I6L86_RS05740 WP_001113232.1 1193114..1194385(-) (rarA) [Streptococcus mitis strain FDAARGOS 1456]
ATGCCAGACAATCTCGCGCTTCGCATGCGCCCTAAAACCATCGACCAGGTCATCGGTCAGGAACATCTGGTCGGACAAGG
AAAAATCATCCGCCGCATGGTAGAAGCCAACCGCCTGTCCTCCATGATTCTCTATGGCCCTCCGGGAATCGGCAAGACCA
GTATTGCCTCTGCCATCGCAGGGACTACTAAGTATGCCTTTCGAACTTTCAATGCGACAGTTGATAGTAAAAAACGACTG
CAAGAAATTGCGGAAGAGGCTAAATTCTCTGGTGGTCTCGTCCTATTACTAGACGAGATTCATAGACTAGATAAAACCAA
GCAAGACTTCCTCTTACCTCTCTTGGAAAGTGGTCTGGTCATCATGATTGGCGCTACGACTGAAAATCCTTTCTTCTCTG
TCACTCCTGCCATTCGTAGCCGTGTTCAAATTTTTGAGTTGGAACCTCTGTCTAACCAAGACGTCAAAGAGGCCCTGCAG
ATAGCTCTAAGTAACCCTGAGCGTGGTTTTGATTTTCCAGTAGAACTAGATGAGGATGCGCTGGATTTCATTGCTACCTC
TACAAACGGAGACCTTCGCTCTGCCTTCAACTCACTTGACTTGGCTGTTCTTTCTACTCCCGAAAATGACAAGGGCATCC
GCCATATCACTCTAGACATCATGGAAAATAGCCTGCAGCGAAGCTACATCACTATGGATAAGGATGGAGATGGCCACTAC
GATGTCCTCTCAGCCCTGCAAAAGTCTATCCGTGGCTCAGATGTTGATGCCAGTCTTCACTATGCTGCCCGCTTGATTGA
GGCTGGTGATTTGCCAAGTCTCGCTCGTCGTTTGACTGTTATCGCTTATGAAGATATCGGTTTGGCCAATCCTGAAGCCC
AGATTCACACCGTGACTGCTCTGGATGCTGCCCAGAAGATTGGTTTCCCAGAAGCCCGTATTCTCATTGCCAATGTCGTG
ATTGATTTGGCCCTTTCTCCGAAATCCAACTCAGCTTATGTGGCTATGGATAAGGCACTTGCTGACCTCAAAACATCAGG
GCACTTGCCTATTCCGCGACACCTGCGTGATGGGCACTACAGTGGAAGCAAGGAACTGGGGAATGCCCAAGACTATCTCT
ATCCACACAACTACCCTGGAAATTGGGTCAAGCAAGACTATCTACCAGAAAAAATTCGTAATCATCACTATTTCCAAGCA
GAAGATACTGGTAAATATGAACGGGCTTTGGCTCAAAGAAAGGAAGCTATCGACCGTTTGCGAAAAATCTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

3D structure

• AlphaFold DB: A0A2I1UDS1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	57.995	99.054	0.574