Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   I6L86_RS01715 Genome accession   NZ_CP077259
Coordinates   384775..387111 (-) Length   778 a.a.
NCBI ID   WP_001035049.1    Uniprot ID   -
Organism   Streptococcus mitis strain FDAARGOS 1456     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 379775..392111
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L86_RS01695 (I6L86_01695) serS 380123..381397 (+) 1275 WP_000884220.1 serine--tRNA ligase -
  I6L86_RS01700 (I6L86_01700) - 381421..382320 (-) 900 WP_000735981.1 TDT family transporter -
  I6L86_RS01705 (I6L86_01705) - 382430..382978 (-) 549 WP_004256949.1 carboxymuconolactone decarboxylase family protein -
  I6L86_RS01710 (I6L86_01710) - 383110..384432 (-) 1323 WP_000891462.1 alanine/glycine:cation symporter family protein -
  I6L86_RS01715 (I6L86_01715) mutS/mutS2 384775..387111 (-) 2337 WP_001035049.1 endonuclease MutS2 Machinery gene
  I6L86_RS01720 (I6L86_01720) - 387214..387762 (-) 549 WP_000622765.1 CvpA family protein -
  I6L86_RS01725 (I6L86_01725) zapA 387759..388061 (-) 303 WP_000002019.1 cell division protein ZapA -
  I6L86_RS01730 (I6L86_01730) rnhC 388148..389029 (+) 882 WP_000146882.1 ribonuclease HIII -
  I6L86_RS01735 (I6L86_01735) lepB 389033..389647 (+) 615 WP_004239180.1 signal peptidase I -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87582.53 Da        Isoelectric Point: 6.9855

>NTDB_id=505975 I6L86_RS01715 WP_001035049.1 384775..387111(-) (mutS/mutS2) [Streptococcus mitis strain FDAARGOS 1456]
MNKKILETLEFNKVKALFEPHLLTEQGLEQLRQLAPTAKADKIKQAFAEMKEMQALFVEQPHFTILATKEIAGVCKRLEM
GADLNIEEFLLLKRVLLSSRELQSFYDNLENVSLEELALWFEKLHDFPQLQGNLQAFNDAGFIENFASEELARIRRKIHD
SESQVRDVLQDLLKQKAQMLTEGIVASRNGRQVLPVKNTYRNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADER
YEMLRILQEISERVRPHAAEIANDAWIIGHLDLIRAKVRFIQERQAVVPQLSENQEIQLLHVCHPLVKNAVANDVHFGQD
LTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVN
QHSLLLLDELGAGTDPQEGAALAMAILEDLRLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPG
RSNAFEIAKRLGLSEVIVGDASQQVNQDNDVNRIIEQLEEQTLESRKRLDNIREVEQENLKMNRALKKLYNELNREKETE
LNKAREQAAEIVDMALSESDQILKNLHSKSQLKPHEIIEAKAKLKKLAPEKVDLSKNKVLQKAKKKRAPKVGDDIVVLSY
GQRGTLISQLKDGRWEAQVGLIKMTLEEKEFDLVQAQQEKQVKKKQVNVVKRTSGRGPQARLDLRGKRYEEAMNELDAFI
DQALLNNMAQVDIIHGIGTGVIREGVTKYLQRNKHVKSFGYAPQNAGGSGATIVTFKG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=505975 I6L86_RS01715 WP_001035049.1 384775..387111(-) (mutS/mutS2) [Streptococcus mitis strain FDAARGOS 1456]
ATGAATAAGAAAATATTAGAAACATTAGAGTTCAATAAGGTCAAGGCCTTGTTTGAGCCTCATTTGTTGACCGAGCAGGG
CTTGGAGCAATTGAGACAGCTGGCTCCGACTGCTAAAGCGGATAAAATTAAACAGGCGTTTGCTGAGATGAAGGAAATGC
AGGCTCTTTTTGTTGAGCAACCGCATTTTACCATTCTTGCAACCAAGGAAATCGCAGGAGTCTGCAAGCGGTTGGAGATG
GGAGCGGACCTCAATATCGAGGAGTTCCTACTTTTGAAGCGCGTGCTTCTTTCTAGCAGAGAACTACAAAGTTTTTATGA
TAATCTGGAAAATGTCAGCTTGGAAGAATTAGCCCTTTGGTTTGAAAAATTACACGATTTTCCGCAATTACAAGGAAATC
TCCAAGCCTTTAATGATGCAGGTTTCATTGAAAATTTTGCCAGTGAAGAATTGGCGCGAATCCGTCGAAAAATCCATGAT
AGCGAGAGTCAGGTCCGTGATGTTTTGCAGGACCTGCTCAAGCAAAAAGCGCAGATGTTGACGGAAGGTATTGTTGCCAG
CAGAAATGGCCGTCAGGTTTTACCAGTTAAAAACACCTACCGCAATAAGATTGCAGGTGTCGTTCATGATATTTCTGCCA
GCGGAAACACCGTCTATATCGAACCCCGTGAGGTGGTCAAACTGAGCGAAGAGATTGCTAGTTTGCGAGCAGATGAGCGC
TATGAAATGCTTCGCATTCTCCAAGAAATTTCTGAACGTGTCCGCCCTCATGCGGCTGAGATTGCCAATGATGCTTGGAT
TATCGGCCATCTGGACTTGATTCGTGCCAAGGTTCGTTTTATCCAAGAAAGGCAAGCAGTCGTTCCTCAGCTGTCAGAAA
ATCAGGAGATTCAACTGCTCCATGTCTGCCACCCTTTGGTCAAAAATGCCGTCGCAAATGATGTCCATTTTGGTCAAGAT
TTAACAGCCATTGTCATTACAGGTCCCAATACAGGTGGGAAGACCATCATGCTTAAAACTCTGGGCTTGACACAGGTTAT
GGCCCAGTCAGGTTTGCCGATTTTGGCAGATAAGGGAAGCCGTGTTGGTATTTTTGAAGAAATCTTTGCCGATATTGGAG
ATGAGCAATCTATTGAACAGAGCTTGTCTACCTTCTCTAGCCACATGACCAATATTGTGGATATTCTTGGCAAGGTTAAC
CAACATTCACTTTTACTCTTGGATGAGTTGGGAGCTGGTACAGACCCTCAAGAAGGAGCTGCTCTTGCCATGGCTATTCT
GGAAGACCTTCGCCTGCGTCAAGTCAAGACAATGGCGACCACCCACTATCCAGAACTCAAGGCCTATGGTATCGAGACAG
CCTTTGTGCAAAATGCCAGCATGGAGTTTGATACTGCGACTCTACGCCCGACCTATCGCTTTATGCAGGGTGTGCCTGGT
CGAAGCAATGCTTTTGAAATTGCTAAACGTTTAGGATTATCTGAAGTTATCGTAGGAGATGCCAGTCAGCAGGTCAATCA
GGACAATGATGTCAACCGAATCATTGAACAACTGGAAGAGCAGACGCTAGAAAGTCGCAAACGCTTGGACAATATCCGTG
AGGTGGAGCAAGAAAATCTTAAGATGAACCGTGCTCTCAAAAAGCTCTACAATGAGCTCAATCGTGAAAAGGAAACCGAG
CTTAACAAGGCGCGTGAACAGGCTGCTGAGATTGTGGACATGGCCCTCAGTGAGAGTGACCAGATTCTCAAAAATCTCCA
CAGTAAATCTCAACTCAAGCCCCACGAAATCATTGAAGCCAAAGCCAAGTTGAAAAAATTGGCTCCTGAAAAAGTAGATT
TGTCTAAAAACAAGGTTCTTCAAAAGGCCAAGAAAAAACGAGCTCCAAAGGTGGGAGATGATATCGTGGTTCTCAGTTAC
GGTCAGCGTGGTACCTTGATCAGTCAACTCAAGGACGGTCGCTGGGAAGCCCAAGTTGGCTTGATTAAGATGACTTTAGA
AGAGAAAGAATTTGACCTTGTTCAAGCCCAGCAAGAAAAGCAAGTCAAGAAGAAACAGGTCAATGTTGTGAAACGAACTT
CTGGTCGTGGACCACAAGCCAGACTGGACCTTCGAGGCAAACGTTATGAAGAGGCCATGAATGAGCTAGATGCCTTTATC
GACCAAGCCTTGCTTAATAATATGGCTCAAGTTGATATCATCCATGGTATCGGAACAGGTGTCATCCGTGAAGGTGTCAC
TAAATACCTACAAAGAAACAAACATGTCAAGAGTTTCGGCTATGCCCCGCAAAATGCTGGAGGCAGTGGTGCGACCATTG
TGACGTTTAAAGGATAG

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-506)

Smr domain (Smr)

(702-777)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

40.455

100

0.411