Detailed information NTG0504455

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: KP952_RS13765
• Genome accession: NZ_CP076731
• Coordinates: 2570898..2572163 (+)
• Length: 421 a.a.
• NCBI ID: WP_213783430.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain Miz-8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2565898..2577163

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KP952_RS13745 (KP952_13745)	yrrB	2567269..2567889 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
KP952_RS13750 (KP952_13750)	mnmA	2567975..2569090 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
KP952_RS13755 (KP952_13755)	iscSA	2569118..2570260 (-)	1143	WP_213783429.1	cysteine desulfurase family protein	-
KP952_RS13760 (KP952_13760)	cymR	2570279..2570695 (-)	417	WP_213783647.1	cysteine metabolism transcriptional regulator CymR	-
KP952_RS13765 (KP952_13765)	rarA	2570898..2572163 (+)	1266	WP_213783430.1	replication-associated recombination protein A	Machinery gene
KP952_RS13770 (KP952_13770)	tcdA	2572203..2572967 (-)	765	WP_014480428.1	ThiF family adenylyltransferase	-
KP952_RS13780 (KP952_13780)	aspS	2573302..2575080 (-)	1779	WP_014480429.1	aspartate--tRNA ligase	-
KP952_RS13785 (KP952_13785)	hisS	2575094..2576368 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
KP952_RS13790 (KP952_13790)	yrzK	2576750..2576920 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46451.24 Da
• Isoelectric Point: 7.2043

>NTDB_id=504455 KP952_RS13765 WP_213783430.1 2570898..2572163(+) (rarA) [Bacillus subtilis subsp. subtilis strain Miz-8]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVTNNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=504455 KP952_RS13765 WP_213783430.1 2570898..2572163(+) (rarA) [Bacillus subtilis subsp. subtilis strain Miz-8]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCACTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACAACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.05	100	0.991