Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   KRG72_RS07965 Genome accession   NZ_CP076703
Coordinates   1602826..1605162 (-) Length   778 a.a.
NCBI ID   WP_258254795.1    Uniprot ID   -
Organism   Streptococcus equinus strain S1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1597826..1610162
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KRG72_RS07940 (KRG72_07950) trxA 1598154..1598468 (-) 315 WP_015695637.1 thioredoxin -
  KRG72_RS07945 (KRG72_07955) - 1598711..1599208 (+) 498 WP_074626832.1 phosphatase PAP2 family protein -
  KRG72_RS07950 (KRG72_07960) nadC 1599287..1600147 (-) 861 WP_258256280.1 carboxylating nicotinate-nucleotide diphosphorylase -
  KRG72_RS07955 (KRG72_07965) - 1600176..1601480 (-) 1305 WP_258254791.1 L-aspartate oxidase -
  KRG72_RS07960 (KRG72_07970) nadA 1601816..1602736 (+) 921 WP_074564410.1 quinolinate synthase NadA -
  KRG72_RS07965 (KRG72_07975) mutS/mutS2 1602826..1605162 (-) 2337 WP_258254795.1 endonuclease MutS2 Machinery gene
  KRG72_RS07970 (KRG72_07980) - 1605251..1605799 (-) 549 WP_006531957.1 CvpA family protein -
  KRG72_RS07975 (KRG72_07985) zapA 1605803..1606111 (-) 309 WP_006531956.1 cell division protein ZapA -
  KRG72_RS07980 (KRG72_07990) rnhC 1606231..1607130 (+) 900 WP_258254801.1 ribonuclease HIII -
  KRG72_RS07985 (KRG72_07995) lepB 1607147..1607740 (+) 594 WP_039696300.1 signal peptidase I -
  KRG72_RS07990 (KRG72_08000) - 1607852..1610051 (+) 2200 Protein_1512 ATP-dependent RecD-like DNA helicase -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87487.80 Da        Isoelectric Point: 6.7262

>NTDB_id=504091 KRG72_RS07965 WP_258254795.1 1602826..1605162(-) (mutS/mutS2) [Streptococcus equinus strain S1]
MNNRILEQLEFDKVKQLFAGYLQTEQGQDELRKLAPMTDSDRISRSFAEMSDMEQIFVEQHGFGLGSLRDISESMRRLEL
DADVNVSEIIDIKKILQVSAEVKHFYNDLENVNLTALNTLFEKIELLPSLQGSLQAINDGGFIENFASHELDRIRRQINH
DESRVRQVLQDILKKQADHLTETLIASRNGRAVLPVKNSYRNRISGVVHDISASGSTVYIEPRAVVQLNEEITQLRADER
HEMARILRELSNMLRPHTNIIRNNAWVLGHLDFVRAKFLFMQENKAVVPQLSTDKTVQLLQARHPLLTNPVANDLHFLDE
LTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSKVAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVNILAAAD
KDSLVLVDELGAGTDPQEGASLAISILEHLRLTQVKTMATTHYPELKAYGIETEFVENASMEFDTETLSPTYHFMQGVPG
RSNAFEIARRLGLAEVIVNEAERLTDSDTDVNRIIERLEEQTHESRKRLDHIKEVEQDNLKFNRAVKKLYNEFSHAKDKE
LEKASAKAQEIVDKAMAESEEILKNLHHKASLKPHEVIEAKSQLKKLAPEVDLSKNKVLKKAKKLRAPRVGDDIIVTAYG
QRGTLINQTKNGKWEAQVGLIKMTLKEDEFSLVKVQEEAQKPKKKQVHVVKKSKNSAGPRARLDLRGKRYEEAMQELDEF
IDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGSGCTIANLG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=504091 KRG72_RS07965 WP_258254795.1 1602826..1605162(-) (mutS/mutS2) [Streptococcus equinus strain S1]
ATGAATAACAGAATTTTAGAACAGTTAGAATTTGATAAAGTCAAGCAACTTTTTGCTGGCTATTTACAAACTGAACAAGG
GCAAGATGAATTGCGCAAGCTTGCTCCGATGACAGATTCTGACCGTATCTCACGTTCTTTTGCTGAAATGTCAGATATGG
AGCAGATTTTTGTTGAGCAACATGGCTTTGGTTTAGGCAGTTTACGTGATATTTCTGAAAGCATGCGCCGCTTGGAATTA
GATGCGGATGTCAATGTTTCAGAGATTATTGATATTAAAAAAATCTTGCAAGTATCAGCAGAAGTTAAGCATTTCTATAA
CGATTTGGAAAATGTTAACTTGACGGCTTTAAACACTCTTTTTGAGAAAATTGAGCTTTTGCCAAGTCTGCAAGGAAGTT
TGCAAGCCATTAACGATGGTGGATTTATTGAGAATTTTGCAAGTCATGAATTAGACCGTATTCGTCGTCAAATCAATCAT
GATGAAAGCAGAGTTCGTCAAGTCTTGCAGGACATTTTGAAAAAGCAAGCTGACCATTTGACAGAGACTTTGATTGCTAG
TCGTAATGGCCGTGCGGTTTTACCGGTGAAAAATAGCTACCGCAATCGCATCTCAGGGGTTGTGCATGATATTTCAGCAT
CAGGAAGCACGGTTTATATTGAGCCGCGTGCAGTGGTGCAACTAAATGAAGAAATCACACAATTACGCGCAGATGAACGC
CATGAAATGGCTCGTATTTTACGCGAATTGTCAAATATGCTTCGCCCTCATACTAATATTATTCGAAATAATGCTTGGGT
TTTGGGACATTTGGATTTTGTGCGTGCAAAATTCCTCTTCATGCAAGAAAACAAAGCAGTTGTTCCACAGTTATCCACAG
ATAAGACTGTGCAGCTCTTGCAAGCCCGTCACCCACTATTGACAAATCCAGTCGCAAATGACTTGCATTTCTTAGATGAA
TTGACAGTTATCGTCATCACTGGTCCAAATACTGGTGGTAAAACCGTCATGTTGAAAACTTTGGGATTGGCACAATTAAT
GGCGCAATCAGGTCTGCCAATTCTAGCTGACAAAGGTAGTAAAGTGGCTGTCTTTAATGAGATTTTCGCTGATATTGGTG
ATGAGCAATCTATCGAGCAAAGCTTGTCAACATTCTCAAGCCACATGACAAATATTGTGAATATCTTGGCAGCAGCTGAC
AAAGATAGTTTGGTACTTGTGGATGAATTGGGGGCAGGTACTGACCCGCAAGAAGGAGCTAGCCTTGCCATTTCAATCTT
GGAGCATTTGCGTTTGACGCAAGTCAAAACCATGGCAACAACTCACTATCCTGAACTAAAAGCTTACGGTATCGAGACAG
AGTTTGTTGAAAATGCCAGCATGGAATTTGACACAGAGACTTTGAGTCCGACTTATCATTTCATGCAAGGTGTTCCAGGA
CGCTCAAATGCCTTTGAAATCGCTCGTCGATTAGGTCTTGCTGAAGTGATTGTCAATGAAGCAGAGCGTTTGACGGATTC
TGATACAGATGTTAACCGCATCATCGAGCGTTTGGAAGAACAAACGCATGAAAGCCGCAAACGTCTTGACCACATCAAAG
AAGTGGAGCAAGATAACCTCAAATTCAACCGTGCGGTTAAGAAACTTTATAACGAATTCTCACACGCCAAAGATAAAGAA
CTTGAAAAAGCTTCTGCTAAGGCACAAGAAATTGTGGATAAAGCCATGGCTGAAAGTGAAGAAATCCTTAAAAATCTTCA
CCACAAAGCAAGCCTTAAACCACATGAAGTCATTGAAGCTAAAAGTCAGTTGAAAAAATTAGCACCTGAAGTTGATTTAT
CGAAAAATAAAGTTCTTAAGAAAGCCAAGAAATTGCGTGCACCGCGCGTGGGTGATGACATTATCGTCACAGCTTACGGT
CAACGCGGAACCTTGATTAACCAAACCAAAAATGGTAAATGGGAAGCGCAAGTTGGTCTTATTAAGATGACGCTTAAAGA
AGACGAATTTAGCCTTGTCAAAGTTCAAGAAGAAGCGCAAAAACCTAAGAAAAAACAAGTTCATGTGGTTAAGAAAAGCA
AGAACTCAGCTGGACCACGTGCTCGACTTGACCTTCGTGGTAAACGTTATGAAGAAGCCATGCAAGAATTGGACGAATTT
ATCGACCAAGCCTTGCTTAACAACATGGCTCAAGTTGATATCATTCACGGTATCGGAACAGGTGTTATCCGTGAAGGGGT
GACAAAATACCTTCGCCGCAACAAGCACGTCAAATCATTCGGCTACGCCCCACAAAACGCAGGTGGCAGTGGCTGTACCA
TTGCAAATCTAGGGTAA

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(630-669)

MutS domain V (MutS_V)

(324-505)

Smr domain (Smr)

(703-776)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

41.519

100

0.422