Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   SCRE_RS03315 Genome accession   NC_022236
Coordinates   664056..665825 (+) Length   589 a.a.
NCBI ID   WP_006267248.1    Uniprot ID   F9P5B8
Organism   Streptococcus constellatus subsp. pharyngis C232     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 659056..670825
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCRE_RS09940 (SCRE_0650) - 659380..659610 (+) 231 WP_080564559.1 DUF1146 family protein -
  SCRE_RS03295 (SCRE_0651) murA 659648..660928 (+) 1281 WP_003069745.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  SCRE_RS03300 (SCRE_0652) - 660921..661097 (+) 177 WP_003069742.1 DNA-directed RNA polymerase subunit beta -
  SCRE_RS03305 (SCRE_0653) endA 661305..662156 (+) 852 WP_006267466.1 DNA/RNA non-specific endonuclease Machinery gene
  SCRE_RS03310 (SCRE_0654) - 662310..664046 (+) 1737 WP_020997716.1 ABC transporter ATP-binding protein -
  SCRE_RS03315 (SCRE_0655) rcrQ 664056..665825 (+) 1770 WP_006267248.1 ABC transporter ATP-binding protein Regulator
  SCRE_RS03320 (SCRE_0656) - 666215..667207 (-) 993 WP_006267175.1 YdcF family protein -
  SCRE_RS03330 (SCRE_0658) - 667934..668314 (+) 381 WP_020997717.1 CidA/LrgA family protein -
  SCRE_RS03335 (SCRE_0659) - 668307..669002 (+) 696 WP_003040138.1 LrgB family protein -
  SCRE_RS03340 (SCRE_0660) - 669128..669640 (+) 513 WP_006267445.1 adenine phosphoribosyltransferase -
  SCRE_RS10900 - 669688..669786 (+) 99 Protein_645 homoserine O-succinyltransferase -
  SCRE_RS10590 - 669812..669946 (+) 135 Protein_646 homoserine O-succinyltransferase -
  SCRE_RS03345 (SCRE_0661) - 669955..670629 (+) 675 WP_006270564.1 DnaD domain-containing protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 66187.40 Da        Isoelectric Point: 5.3708

>NTDB_id=50397 SCRE_RS03315 WP_006267248.1 664056..665825(+) (rcrQ) [Streptococcus constellatus subsp. pharyngis C232]
MKQHSFMRLWSYLKVYKLSVILAIFLKVVSIVMSVLEPFVLGLAITELTRNVLDIAKGVEGASINTTYVFWVMALYLLRG
LFYEIGAYYSNYFMTNAVQNTVRDMRNELSSKINQIPVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQVVNAVLTIAL
VIGMVLYLNFQLALIVIASIPLTYFGATFILKKSQPYFKKQADTLGVMNGFVQENLTGFNVLKLYGREETSSDDFREITQ
NLQEVGFKASFISGLMMPILNAISDLTYLLVAVIGGLQVISGQLTIGNMQAFVQYVWQVNQPIQNLTQLAGQLQSAKSSL
DRIFQVLDEPDEVTNIKEQLEHDLTGQVSFQHVDFQYVESKPLIRDFNLEVKPGEMVAIVGPTGAGKTTLINLLMRFYDV
TAGSISVDGHDIRNLSRQEYRKQFGMVLQDAWLYEGTVKENLRFGNLNATDEEIVEAAKAANVDHFIRTLPGGYNMEMNQ
ESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKNLMQGRTSFVIAHRLSTIQEADKILVLKDGQI
IEQGTHESLLADKGFYYDLYTSQFAKKEA

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=50397 SCRE_RS03315 WP_006267248.1 664056..665825(+) (rcrQ) [Streptococcus constellatus subsp. pharyngis C232]
ATGAAACAACATAGTTTTATGCGTTTGTGGAGTTACTTAAAGGTTTATAAACTCTCAGTAATCCTTGCTATCTTTTTGAA
GGTGGTGAGTATTGTGATGAGCGTGCTGGAGCCTTTTGTACTTGGTCTTGCTATTACAGAATTGACACGAAATGTGCTGG
ACATAGCAAAAGGAGTCGAAGGCGCCAGTATAAACACAACATATGTCTTTTGGGTAATGGCACTTTACCTTTTGCGTGGT
TTGTTCTATGAAATTGGGGCTTACTATTCTAATTATTTTATGACCAATGCAGTGCAAAATACAGTACGTGACATGCGCAA
TGAGTTGAGTTCTAAAATTAATCAAATTCCAGTTTCTTACTTTGATAAGCATCAATTTGGAGATTTACTAGGGCGCTTTA
CCAGTGATGTAGAGACTGTTTCAAATGCGCTTCAACAATCATTCTTACAAGTTGTAAATGCGGTTTTGACCATTGCCTTA
GTTATCGGAATGGTCTTGTATCTTAATTTTCAACTGGCTTTGATAGTGATTGCTAGCATTCCATTGACCTATTTTGGGGC
GACCTTTATTTTGAAAAAATCACAACCATATTTTAAAAAGCAAGCAGATACGCTAGGTGTCATGAATGGATTTGTTCAAG
AAAATCTAACTGGTTTTAATGTGCTGAAACTCTATGGTCGTGAAGAAACATCTTCAGACGATTTTCGAGAAATCACGCAA
AACCTCCAAGAAGTCGGGTTCAAAGCTAGTTTTATTTCTGGCTTGATGATGCCAATTTTGAACGCAATTTCAGATTTGAC
TTATCTGCTTGTAGCGGTCATTGGTGGTTTGCAAGTCATTTCTGGACAATTAACAATTGGGAACATGCAAGCTTTTGTAC
AATATGTATGGCAAGTAAACCAACCAATTCAAAATTTAACGCAGTTAGCTGGGCAATTACAAAGTGCTAAGTCTTCGCTG
GATCGTATTTTCCAAGTCTTAGATGAACCAGACGAAGTAACGAATATAAAAGAGCAATTAGAACATGATTTGACAGGACA
GGTTAGTTTTCAACATGTTGATTTTCAATATGTAGAAAGCAAACCGCTCATTCGCGACTTCAATTTGGAGGTAAAGCCGG
GTGAAATGGTAGCGATTGTCGGTCCGACTGGTGCTGGAAAGACTACCCTCATCAATCTATTGATGCGTTTTTACGATGTA
ACTGCCGGTTCAATTTCTGTTGACGGCCATGATATTCGCAATTTGTCTCGTCAAGAATACCGCAAACAATTTGGTATGGT
CTTGCAAGACGCTTGGCTTTATGAAGGAACAGTCAAGGAAAACTTGCGCTTTGGAAATCTGAATGCGACAGATGAAGAGA
TTGTGGAAGCTGCCAAAGCGGCTAATGTCGATCATTTCATTCGGACACTTCCAGGTGGCTATAATATGGAAATGAATCAA
GAGTCTAGCAATATCTCACTAGGACAAAAACAATTGCTGACCATTGCGCGAGCATTATTAGCCGATCCAAAAATCTTGAT
TTTGGATGAAGCAACCTCGTCCGTTGATACACGCCTAGAGCTCTTGATTCAAAAAGCGATGAAGAACCTCATGCAAGGAC
GAACAAGCTTTGTCATTGCTCACCGCTTATCGACGATTCAAGAGGCGGACAAGATTTTGGTTCTCAAAGACGGGCAAATC
ATTGAGCAAGGAACTCACGAATCGCTTTTAGCTGATAAAGGTTTCTATTACGACTTATATACAAGTCAGTTTGCTAAGAA
AGAGGCCTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(365-513)

ABC transporter transmembrane region (ABC_membrane)

(20-302)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F9P5B8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

44.444

100

0.448

Multiple sequence alignment