Detailed information NTG0502633

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: KO461_RS10480
• Genome accession: NZ_CP076449
• Coordinates: 2146164..2147504 (-)
• Length: 446 a.a.
• NCBI ID: WP_005540264.1
• Uniprot ID: A0A142G2C3
• Organism: Aggregatibacter actinomycetemcomitans strain CU1000N
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2141164..2152504

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KO461_RS10465 (KO461_10460)	cdd	2141428..2142324 (+)	897	WP_005549823.1	cytidine deaminase	-
KO461_RS10470 (KO461_10465)	serS	2142404..2143720 (-)	1317	WP_005540260.1	serine--tRNA ligase	-
KO461_RS10475 (KO461_10470)	-	2144027..2145667 (+)	1641	WP_005565908.1	anaerobic C4-dicarboxylate transporter	-
KO461_RS10480 (KO461_10475)	rarA	2146164..2147504 (-)	1341	WP_005540264.1	replication-associated recombination protein A	Machinery gene
KO461_RS10485 (KO461_10480)	lolA	2147517..2148134 (-)	618	WP_005565910.1	outer membrane lipoprotein chaperone LolA	-
KO461_RS10490 (KO461_10485)	-	2148226..2150970 (-)	2745	WP_005540267.1	DNA translocase FtsK	-
KO461_RS10495 (KO461_10490)	lrp	2150974..2151453 (-)	480	WP_005540269.1	leucine-responsive transcriptional regulator Lrp	-
KO461_RS11620	-	2152023..2152127 (+)	105	WP_410170426.1	hypothetical protein	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49757.72 Da
• Isoelectric Point: 6.5134

>NTDB_id=502633 KO461_RS10480 WP_005540264.1 2146164..2147504(-) (rarA) [Aggregatibacter actinomycetemcomitans strain CU1000N]
MSNFSFDFNENDFRPLAARMRPTTLAQYCGQSHLLGEGKPLRKAIEAGYVHSMIFWGPPGTGKTTLAEIISHRINAEVER
ISAVTSGIKEIREAIDKAKQNKLAGLRTILFVDEVHRFNKSQQDAFLPHIEDGTIIFIGATTENPSFELNNALLSRARVY
ILKPLSAQEIERVLQQAIDDPENGLGKVRLNLQENLLSLLAEYVNGDARLALNCLEMMVDMAGESENGKILDRTLLTEVL
GERQARFDKQGDLFYDFISALHKSIRGSAPDAALYWYARIITAGGEPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAAEGERAIAQAIVYLAVAPKSNAVYLAFKAAKKLATESADFDVPEHLRNAPTSFMKDLGFGAEYRYAHNEPNAYAA
GENYFPPQLKDTQFYFPTTRGMEIKIKEKLEWLRGLDQESGKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=502633 KO461_RS10480 WP_005540264.1 2146164..2147504(-) (rarA) [Aggregatibacter actinomycetemcomitans strain CU1000N]
ATGTCTAACTTCAGCTTTGATTTCAACGAAAATGACTTTCGCCCGCTTGCCGCAAGAATGCGCCCCACAACATTGGCGCA
ATATTGCGGTCAGTCTCATTTATTGGGCGAAGGAAAACCGTTGCGCAAAGCTATTGAAGCGGGATATGTTCATTCCATGA
TTTTCTGGGGCCCGCCTGGTACCGGTAAAACCACTTTGGCGGAAATTATTTCCCATCGCATTAATGCGGAAGTGGAGCGC
ATTTCCGCCGTCACCAGCGGCATTAAAGAAATCCGTGAAGCCATCGACAAAGCCAAACAAAACAAACTGGCGGGTTTGCG
CACCATTTTGTTTGTAGATGAAGTGCATCGTTTCAACAAAAGCCAGCAAGACGCTTTCCTGCCGCATATTGAAGACGGTA
CCATTATTTTTATCGGCGCTACCACAGAAAATCCCTCCTTTGAACTCAATAACGCCTTGCTTTCCCGCGCGCGGGTTTAT
ATTCTAAAACCGCTTTCTGCGCAGGAAATCGAACGGGTTTTACAGCAAGCCATTGATGACCCGGAAAACGGTTTAGGCAA
AGTGCGGTTAAATTTACAAGAGAATTTATTGTCCCTGTTGGCAGAATACGTCAACGGCGACGCCCGTCTTGCTTTGAACT
GCCTGGAAATGATGGTGGACATGGCGGGCGAATCGGAAAACGGCAAAATTTTAGACCGCACTTTACTCACGGAAGTGTTG
GGCGAACGGCAGGCGCGTTTTGATAAACAAGGTGACCTTTTCTACGATTTCATTTCCGCACTACACAAATCCATTCGTGG
ATCCGCCCCTGATGCGGCGTTATACTGGTACGCGCGCATTATCACTGCCGGTGGTGAGCCTCTTTATGTGGCGCGTCGCT
TATTGGCAATTGCTTCCGAAGATGTGGGCAACGCCGACCCGCGCGCCATGCAGGTGGCGCTCGCCGCCTGGGATTGTTTC
ACCCGCGTCGGTGCCGCCGAAGGCGAACGTGCTATCGCACAAGCCATTGTGTATTTAGCCGTTGCACCGAAAAGCAACGC
CGTTTATCTCGCTTTCAAAGCCGCCAAAAAATTGGCGACCGAATCCGCCGATTTCGACGTCCCTGAACATCTCCGCAACG
CCCCGACCAGCTTCATGAAAGACCTCGGCTTCGGCGCCGAATACCGCTACGCCCACAATGAACCTAACGCCTACGCTGCC
GGCGAAAACTACTTCCCGCCACAACTGAAAGACACCCAATTCTATTTCCCGACCACCAGAGGCATGGAAATTAAGATTAA
GGAGAAGTTGGAATGGCTGCGGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAG

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• ATPase family associated with various cellular activities (AAA) (AAA) (53-163)

• AAA C-terminal domain (AAA_assoc_2) (189-266)

3D structure

• AlphaFold DB: A0A142G2C3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.416	92.152	0.363