Detailed information NTG0502532

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: KMZ16_RS13985
• Genome accession: NZ_CP076445
• Coordinates: 2680110..2681375 (+)
• Length: 421 a.a.
• NCBI ID: WP_015714437.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain ps4100
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2675110..2686375

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KMZ16_RS13965 (KMZ16_13840)	yrrB	2676481..2677101 (-)	621	WP_211197310.1	tetratricopeptide repeat protein	-
KMZ16_RS13970 (KMZ16_13845)	mnmA	2677187..2678302 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
KMZ16_RS13975 (KMZ16_13850)	iscSA	2678330..2679472 (-)	1143	WP_003229769.1	cysteine desulfurase family protein	-
KMZ16_RS13980 (KMZ16_13855)	cymR	2679491..2679907 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
KMZ16_RS13985 (KMZ16_13860)	rarA	2680110..2681375 (+)	1266	WP_015714437.1	replication-associated recombination protein A	Machinery gene
KMZ16_RS13990 (KMZ16_13865)	tcdA	2681415..2682179 (-)	765	WP_014480428.1	ThiF family adenylyltransferase	-
KMZ16_RS14000 (KMZ16_13875)	aspS	2682514..2684292 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
KMZ16_RS14005 (KMZ16_13880)	hisS	2684306..2685580 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
KMZ16_RS14010 (KMZ16_13885)	yrzK	2685962..2686132 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.35 Da
• Isoelectric Point: 7.2043

>NTDB_id=502532 KMZ16_RS13985 WP_015714437.1 2680110..2681375(+) (rarA) [Bacillus subtilis subsp. subtilis strain ps4100]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=502532 KMZ16_RS13985 WP_015714437.1 2680110..2681375(+) (rarA) [Bacillus subtilis subsp. subtilis strain ps4100]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GTCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.762	100	0.998