Detailed information NTG0500474

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: IQ863_RS20380
• Genome accession: NZ_CP064270
• Coordinates: 3954441..3956798 (+)
• Length: 785 a.a.
• NCBI ID: WP_014458149.1
• Uniprot ID: A0A8D3WV14
• Organism: Priestia megaterium strain N447-3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3949441..3961798

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IQ863_RS20360	-	3950798..3951214 (+)	417	WP_013059297.1	Rrf2 family transcriptional regulator	-
IQ863_RS20365	-	3951238..3952380 (+)	1143	WP_042991874.1	cysteine desulfurase family protein	-
IQ863_RS20370	mnmA	3952487..3953599 (+)	1113	WP_014458148.1	tRNA 2-thiouridine(34) synthase MnmA	-
IQ863_RS20375	-	3953757..3954416 (+)	660	WP_013085089.1	tetratricopeptide repeat protein	-
IQ863_RS20380	recD2	3954441..3956798 (+)	2358	WP_014458149.1	ATP-dependent RecD-like DNA helicase	Machinery gene
IQ863_RS20385	-	3956940..3957131 (+)	192	WP_013059292.1	hypothetical protein	-
IQ863_RS20390	-	3957157..3957291 (+)	135	WP_013059291.1	YrzQ family protein	-
IQ863_RS20395	-	3957406..3958467 (+)	1062	WP_013059290.1	AI-2E family transporter	-
IQ863_RS20400	alaS	3958856..3961489 (+)	2634	WP_115654943.1	alanine--tRNA ligase	-

Sequence

Protein

• Length: 785 a.a.
• Molecular weight: 88805.18 Da
• Isoelectric Point: 5.0229

>NTDB_id=500474 IQ863_RS20380 WP_014458149.1 3954441..3956798(+) (recD2) [Priestia megaterium strain N447-3]
MNEEQVNPSQPERHYISGTSIVTVFHNEENLYNVTRIRIKKTNLEIEDKETVVTGYFPKLNEDEVYTFYGDFKEHPKFGL
QFHVEQFKKELPQSRQGVVQYLSSDLFHGIGKKTAENIVDALGERAIFRILQNESVLKEVPRLSADKAEALVTQLREHQG
LEEVMVKLTDLGFGPQLSMKIFQAYKQEALEIVQNNPYQLVEDIQGIGFSRADELGKRLGMATNHPDRLRAGILYVIEQE
CNQMGHVYVTADQLYGKTAELLRKSRHENLSEMDLTREVDALKADKKLIIQDEKIYFPPLFYAEKGLVKAIQTIMAQTQY
EEQFPESEFLLALGELEERLDVQYAPSQRKGIQTALMSPMLLLTGGPGTGKTTVIKGIVELYAELHGCSLNPGDYKKDEA
FPVLLVAPTGRAAKRMSEATGLPAVTIHRLLKWNGQEGFDHNEENPIDGKLLIVDEVSMVDLWLAHQLFKSLPANLQVIL
VGDEDQLPSVGPGQVLKDLLSSEVVPTVRLTDVYRQAEGSSIIDLAHEIKKGKLPEDLSRQQGDRSFIRCQGQHITNVVQ
QVCGNALKKGYTAKDIQVLAPMYKGPAGIDKLNEVLQELFNPASEQRRELKHGDITYRVGDKVLQLVNQPDSNVFNGDMG
EIVSVFFAKENTEKQDMLVISYEGNEVTYTKQDFNQITHAYCCSIHKSQGSEFPIVVLPIVKSYYRMLRRNLLYTAVTRS
KQFLILCGEDEAFQLGVSRNEDSVRQTNLQPLLRESLDNDIEDPEIPFMKDANIGMENVTPYDFM

Nucleotide

• Length: 2358 bp

>NTDB_id=500474 IQ863_RS20380 WP_014458149.1 3954441..3956798(+) (recD2) [Priestia megaterium strain N447-3]
ATGAACGAAGAACAAGTGAACCCTTCACAGCCAGAACGTCATTATATAAGCGGCACGTCAATTGTAACGGTCTTTCATAA
CGAAGAAAACTTATATAACGTTACGCGGATACGGATCAAAAAAACAAATTTAGAGATTGAAGATAAAGAAACGGTTGTTA
CAGGCTATTTTCCTAAGTTGAATGAAGATGAAGTATACACGTTTTACGGGGACTTCAAAGAGCATCCAAAGTTCGGCCTG
CAGTTTCATGTTGAACAGTTTAAAAAAGAACTTCCGCAATCAAGGCAAGGGGTTGTTCAGTACCTATCTAGCGATTTATT
TCACGGAATCGGTAAAAAAACCGCTGAAAATATTGTGGACGCCCTAGGAGAACGCGCTATCTTTCGTATTTTACAAAATG
AGTCTGTGCTAAAAGAGGTGCCGAGGCTTTCAGCCGACAAGGCAGAAGCTTTAGTCACTCAGCTTCGTGAACATCAAGGG
TTAGAAGAAGTAATGGTAAAGCTGACGGACCTCGGGTTTGGACCGCAGCTTTCGATGAAGATTTTCCAAGCGTACAAACA
AGAAGCGCTTGAAATTGTTCAAAATAACCCTTATCAGCTCGTAGAAGATATTCAAGGGATTGGTTTTAGCCGGGCCGATG
AACTTGGAAAGAGACTTGGTATGGCAACCAATCATCCTGATCGTTTGCGTGCGGGTATTTTATACGTCATTGAGCAAGAA
TGCAATCAAATGGGACATGTATACGTCACGGCAGATCAGCTGTATGGAAAAACAGCAGAGCTTCTTCGAAAAAGCAGGCA
TGAGAATCTGTCTGAAATGGATCTTACAAGAGAAGTAGACGCATTAAAAGCAGACAAAAAGCTTATTATTCAAGACGAAA
AAATTTATTTTCCTCCCCTTTTTTATGCTGAAAAAGGACTGGTTAAAGCTATTCAAACAATTATGGCTCAAACGCAGTAC
GAAGAGCAGTTTCCAGAATCAGAATTTTTACTAGCTCTGGGTGAGCTAGAAGAGCGATTAGACGTGCAATATGCACCGTC
TCAGCGCAAGGGTATACAAACCGCTTTAATGTCTCCAATGCTTCTTTTAACAGGTGGACCAGGTACAGGGAAAACAACGG
TTATTAAAGGAATAGTCGAACTCTATGCAGAACTTCATGGATGTTCGTTAAATCCAGGGGACTATAAAAAAGATGAAGCT
TTTCCTGTTTTACTTGTCGCACCTACTGGACGAGCTGCTAAACGAATGAGCGAAGCGACGGGACTTCCGGCGGTTACGAT
TCACAGATTATTAAAATGGAACGGACAAGAAGGATTTGATCATAATGAGGAGAATCCAATTGACGGAAAATTACTGATTG
TGGATGAAGTATCAATGGTAGATTTGTGGCTTGCTCATCAGCTGTTTAAATCTCTTCCTGCTAATTTACAGGTTATTTTA
GTTGGAGACGAAGACCAGCTCCCTTCAGTAGGGCCGGGACAGGTGTTAAAAGATTTACTGAGTTCAGAAGTAGTTCCTAC
CGTCCGCCTTACGGATGTATACAGGCAAGCGGAAGGATCGTCAATTATTGATTTGGCTCATGAAATAAAAAAAGGAAAGC
TTCCGGAAGACTTATCGAGGCAGCAAGGAGATCGTTCCTTTATTCGTTGTCAAGGACAGCACATCACAAACGTCGTGCAA
CAAGTTTGCGGGAATGCGTTAAAAAAAGGCTATACGGCTAAAGATATTCAAGTTTTAGCTCCTATGTATAAAGGTCCTGC
AGGGATTGATAAACTGAATGAAGTTCTTCAGGAATTATTTAACCCGGCTTCTGAGCAAAGAAGAGAGCTTAAGCACGGAG
ATATTACGTACCGAGTCGGAGATAAAGTGCTGCAGCTTGTAAATCAGCCGGATAGCAACGTATTTAACGGAGACATGGGA
GAAATCGTCTCGGTTTTCTTTGCCAAAGAAAATACGGAAAAACAGGATATGCTGGTTATTTCATATGAAGGAAATGAAGT
AACTTACACAAAGCAAGACTTTAATCAAATAACCCATGCATATTGCTGTTCCATCCATAAATCACAGGGAAGTGAATTTC
CTATTGTTGTACTTCCGATTGTCAAAAGCTATTACCGAATGCTGCGACGCAATTTGCTTTATACAGCCGTTACGCGAAGC
AAACAATTTTTAATTTTATGCGGCGAAGACGAAGCGTTTCAGCTTGGAGTCAGCCGAAATGAAGACAGCGTCCGACAAAC
GAACCTACAGCCCTTGCTTCGAGAAAGCTTAGATAACGATATAGAAGATCCCGAAATTCCATTTATGAAAGATGCAAATA
TTGGGATGGAAAACGTTACGCCGTATGATTTTATGTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (344-551)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (679-727)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (592-659)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	63.939	99.618	0.637