Detailed information
Bioinformatically predicted
Overview
| Name | rarA | Type | Machinery gene |
| Locus tag | KIK01_RS04750 | Genome accession | NZ_CP075489 |
| Coordinates | 919944..921224 (-) | Length | 426 a.a. |
| NCBI ID | WP_011374543.1 | Uniprot ID | Q38XE0 |
| Organism | Latilactobacillus sakei subsp. sakei strain ob4.1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 914944..926224
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KIK01_RS04720 (KIK01_04720) | - | 915181..915783 (-) | 603 | WP_016265012.1 | nitroreductase family protein | - |
| KIK01_RS04725 (KIK01_04725) | - | 916111..917085 (+) | 975 | WP_016265013.1 | DUF2785 domain-containing protein | - |
| KIK01_RS04730 (KIK01_04730) | - | 917112..917762 (+) | 651 | WP_016265014.1 | HAD family phosphatase | - |
| KIK01_RS04735 (KIK01_04735) | - | 917902..918756 (+) | 855 | WP_025015819.1 | helix-turn-helix transcriptional regulator | - |
| KIK01_RS04740 (KIK01_04740) | - | 918797..919291 (-) | 495 | WP_011374541.1 | universal stress protein | - |
| KIK01_RS04745 (KIK01_04745) | - | 919354..919629 (-) | 276 | WP_016265016.1 | hypothetical protein | - |
| KIK01_RS04750 (KIK01_04750) | rarA | 919944..921224 (-) | 1281 | WP_011374543.1 | replication-associated recombination protein A | Machinery gene |
| KIK01_RS04755 (KIK01_04755) | gshAB | 921357..923636 (+) | 2280 | WP_025015818.1 | bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB | - |
| KIK01_RS04760 (KIK01_04760) | - | 923691..924134 (-) | 444 | WP_016265018.1 | YueI family protein | - |
| KIK01_RS04765 (KIK01_04765) | - | 924205..924810 (+) | 606 | WP_016265019.1 | DUF1054 domain-containing protein | - |
| KIK01_RS04770 (KIK01_04770) | rpsD | 924906..925511 (-) | 606 | WP_011374547.1 | 30S ribosomal protein S4 | - |
Sequence
Protein
Download Length: 426 a.a. Molecular weight: 46634.27 Da Isoelectric Point: 6.8680
>NTDB_id=498698 KIK01_RS04750 WP_011374543.1 919944..921224(-) (rarA) [Latilactobacillus sakei subsp. sakei strain ob4.1]
MQQPLAYRMRPTNIDEIVGQTHLVGPQKIIRRMVDAKLLSSMILYGPPGTGKTSIASAIAGSTQYAFRMLNAATDSKKDL
QIVAEEAKMSGTVILLLDEIHRLDKTKQDFLLPHLESGRIVLIGATTENPYITINPAIRSRTQIFEVHPLNEADIHVAIQ
RALTDPQKGLGDEPVNLDETAEKYLAQVTNGDLRSALNALELAVRSTPKNPETGLIDIDIAVIEECVQRKAITHDKDGDA
HYDVISAFQKSVRGSDVDAALHYMGRLIEAGDLPSISRRLMTMAYEDVGLANPQACARTVEAVTAAKQLGFPEARIPLAV
AVIDLCLSPKSNSAITAIDNALGDIRAGKAGEVPAHLKDAHYAGAAKLGHGVDYKYPHNYPNDWVAQDYLPTKLLGSHYY
EAKATGKYEQVLKQQLERLRQASRHK
MQQPLAYRMRPTNIDEIVGQTHLVGPQKIIRRMVDAKLLSSMILYGPPGTGKTSIASAIAGSTQYAFRMLNAATDSKKDL
QIVAEEAKMSGTVILLLDEIHRLDKTKQDFLLPHLESGRIVLIGATTENPYITINPAIRSRTQIFEVHPLNEADIHVAIQ
RALTDPQKGLGDEPVNLDETAEKYLAQVTNGDLRSALNALELAVRSTPKNPETGLIDIDIAVIEECVQRKAITHDKDGDA
HYDVISAFQKSVRGSDVDAALHYMGRLIEAGDLPSISRRLMTMAYEDVGLANPQACARTVEAVTAAKQLGFPEARIPLAV
AVIDLCLSPKSNSAITAIDNALGDIRAGKAGEVPAHLKDAHYAGAAKLGHGVDYKYPHNYPNDWVAQDYLPTKLLGSHYY
EAKATGKYEQVLKQQLERLRQASRHK
Nucleotide
Download Length: 1281 bp
>NTDB_id=498698 KIK01_RS04750 WP_011374543.1 919944..921224(-) (rarA) [Latilactobacillus sakei subsp. sakei strain ob4.1]
ATGCAACAACCACTCGCATATCGTATGCGCCCCACAAATATCGATGAAATTGTGGGTCAAACACACTTAGTGGGTCCGCA
AAAAATCATTCGACGAATGGTTGATGCCAAATTACTCTCGTCAATGATTCTTTATGGCCCACCTGGCACCGGAAAAACCA
GTATTGCCAGCGCCATTGCTGGTAGTACGCAATACGCCTTTCGGATGCTGAATGCCGCAACAGATAGTAAAAAGGATCTT
CAAATTGTCGCTGAAGAAGCTAAAATGAGCGGCACTGTTATTTTATTACTCGATGAAATTCATCGGCTCGATAAAACAAA
ACAGGATTTCTTACTGCCCCATCTCGAAAGCGGTCGGATTGTTCTAATTGGCGCTACTACCGAAAATCCCTACATCACGA
TCAACCCCGCCATTCGGAGTCGGACCCAGATATTTGAAGTTCACCCACTTAATGAAGCCGATATTCACGTCGCCATCCAG
CGGGCCTTAACCGACCCGCAAAAAGGCTTGGGCGATGAACCCGTTAACCTCGATGAAACGGCTGAAAAATACCTCGCACA
AGTCACCAATGGTGATCTTCGAAGTGCCTTAAACGCGCTAGAATTAGCCGTCCGCTCGACACCTAAAAACCCAGAAACTG
GTTTAATCGACATTGATATTGCTGTCATTGAGGAATGCGTTCAAAGAAAGGCCATTACCCATGATAAAGATGGCGATGCG
CACTATGACGTCATCTCGGCTTTTCAAAAATCTGTTCGCGGTAGCGACGTTGACGCCGCTTTACATTATATGGGCCGCTT
AATTGAAGCCGGTGATCTGCCTTCCATTAGTCGCCGTTTGATGACGATGGCTTATGAAGACGTTGGTTTAGCTAATCCGC
AAGCCTGCGCTCGAACCGTTGAAGCAGTAACAGCCGCCAAGCAATTAGGTTTCCCCGAAGCACGGATTCCATTGGCAGTT
GCCGTGATTGATCTCTGTCTCTCACCAAAATCAAACTCCGCTATCACAGCAATCGATAATGCGTTAGGCGACATTCGCGC
CGGTAAGGCCGGTGAAGTGCCCGCGCATTTAAAAGACGCCCATTACGCCGGTGCTGCTAAGCTTGGTCATGGTGTAGACT
ACAAGTATCCACACAACTATCCCAATGATTGGGTCGCACAAGATTACCTCCCGACAAAACTTTTAGGGAGTCATTACTAC
GAAGCCAAAGCAACTGGTAAATACGAGCAAGTTTTAAAACAACAACTTGAACGGCTGAGACAAGCAAGCCGCCACAAGTG
A
ATGCAACAACCACTCGCATATCGTATGCGCCCCACAAATATCGATGAAATTGTGGGTCAAACACACTTAGTGGGTCCGCA
AAAAATCATTCGACGAATGGTTGATGCCAAATTACTCTCGTCAATGATTCTTTATGGCCCACCTGGCACCGGAAAAACCA
GTATTGCCAGCGCCATTGCTGGTAGTACGCAATACGCCTTTCGGATGCTGAATGCCGCAACAGATAGTAAAAAGGATCTT
CAAATTGTCGCTGAAGAAGCTAAAATGAGCGGCACTGTTATTTTATTACTCGATGAAATTCATCGGCTCGATAAAACAAA
ACAGGATTTCTTACTGCCCCATCTCGAAAGCGGTCGGATTGTTCTAATTGGCGCTACTACCGAAAATCCCTACATCACGA
TCAACCCCGCCATTCGGAGTCGGACCCAGATATTTGAAGTTCACCCACTTAATGAAGCCGATATTCACGTCGCCATCCAG
CGGGCCTTAACCGACCCGCAAAAAGGCTTGGGCGATGAACCCGTTAACCTCGATGAAACGGCTGAAAAATACCTCGCACA
AGTCACCAATGGTGATCTTCGAAGTGCCTTAAACGCGCTAGAATTAGCCGTCCGCTCGACACCTAAAAACCCAGAAACTG
GTTTAATCGACATTGATATTGCTGTCATTGAGGAATGCGTTCAAAGAAAGGCCATTACCCATGATAAAGATGGCGATGCG
CACTATGACGTCATCTCGGCTTTTCAAAAATCTGTTCGCGGTAGCGACGTTGACGCCGCTTTACATTATATGGGCCGCTT
AATTGAAGCCGGTGATCTGCCTTCCATTAGTCGCCGTTTGATGACGATGGCTTATGAAGACGTTGGTTTAGCTAATCCGC
AAGCCTGCGCTCGAACCGTTGAAGCAGTAACAGCCGCCAAGCAATTAGGTTTCCCCGAAGCACGGATTCCATTGGCAGTT
GCCGTGATTGATCTCTGTCTCTCACCAAAATCAAACTCCGCTATCACAGCAATCGATAATGCGTTAGGCGACATTCGCGC
CGGTAAGGCCGGTGAAGTGCCCGCGCATTTAAAAGACGCCCATTACGCCGGTGCTGCTAAGCTTGGTCATGGTGTAGACT
ACAAGTATCCACACAACTATCCCAATGATTGGGTCGCACAAGATTACCTCCCGACAAAACTTTTAGGGAGTCATTACTAC
GAAGCCAAAGCAACTGGTAAATACGAGCAAGTTTTAAAACAACAACTTGAACGGCTGAGACAAGCAAGCCGCCACAAGTG
A
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rarA | Bacillus subtilis subsp. subtilis str. 168 |
66.427 |
97.887 |
0.65 |