Detailed information NTG0497644

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: KIH30_RS05585
• Genome accession: NZ_CP075343
• Coordinates: 1256913..1258268 (-)
• Length: 451 a.a.
• NCBI ID: WP_199206986.1
• Uniprot ID: A0ABT0VXI2
• Organism: Streptomyces sp. EMB24
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1251913..1263268

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIH30_RS05565	alaS	1252290..1254962 (-)	2673	WP_199206984.1	alanine--tRNA ligase	-
KIH30_RS05570	-	1254962..1255330 (-)	369	WP_199206985.1	hypothetical protein	-
KIH30_RS05575	-	1255338..1255787 (-)	450	WP_114873274.1	DUF948 domain-containing protein	-
KIH30_RS05580	rpsD	1255997..1256611 (-)	615	WP_019523761.1	30S ribosomal protein S4	-
KIH30_RS05585	rarA	1256913..1258268 (-)	1356	WP_199206986.1	replication-associated recombination protein A	Machinery gene
KIH30_RS05590	-	1258312..1258980 (-)	669	WP_199206987.1	vitamin K epoxide reductase family protein	-
KIH30_RS05595	hisS	1259242..1260504 (-)	1263	WP_251099287.1	histidine--tRNA ligase	-
KIH30_RS05600	-	1260516..1261226 (-)	711	WP_268219460.1	MBL fold metallo-hydrolase	-
KIH30_RS05605	-	1261410..1262231 (+)	822	WP_122214943.1	peptidylprolyl isomerase	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 48188.55 Da
• Isoelectric Point: 6.5132

>NTDB_id=497644 KIH30_RS05585 WP_199206986.1 1256913..1258268(-) (rarA) [Streptomyces sp. EMB24]
MEPDLFTAAAEERQEKDPTGSPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGEGSSGPAGPSSVILWGPPGTGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRASGGYGQETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDDDVRGLLKRALTDERGLKGAVTLPDDTAEHLLRIAGGDARRALTALEAAAGAALDKGEAE
VSLATLEETVDRAAVKYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPNAL
QIAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNAATTAIGAALEDVRKGLAGPVPSHLRDSHYKGAGKLGHGKGYTY
PHDLPEGIAAQQYAPDALKDREYYEPTRHGAEARYADAVEWTRKHLGRKRS

Nucleotide

• Length: 1356 bp

>NTDB_id=497644 KIH30_RS05585 WP_199206986.1 1256913..1258268(-) (rarA) [Streptomyces sp. EMB24]
GTGGAGCCCGACCTGTTCACCGCCGCAGCAGAAGAACGCCAGGAGAAGGACCCGACCGGCAGCCCTCTGGCGGTCCGGAT
GCGCCCGCGCACCCTCGACGAGGTGGTGGGCCAGCAGCACCTGCTGAAGCCGGGCTCCCCCCTGCGCAGACTGGTCGGCG
AAGGCTCGTCGGGCCCCGCGGGACCCTCCTCCGTGATCCTCTGGGGCCCGCCCGGCACGGGCAAGACCACCCTCGCCTAC
GTGGTCTCCAAGGCCACCAACAAGCGCTTCGTGGAGCTGTCCGCGATCACCGCGGGCGTCAAGGAGGTCCGCGCGGTCAT
CGACGGCGCCCGCCGCGCCTCCGGCGGGTACGGCCAGGAGACGGTCCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCCCTGCTCCCCGCCGTGGAGAACCGCTGGGTCACGCTCATCGCCGCGACCACCGAGAACCCCTACTTC
TCGGTCATCTCCCCGCTGCTCTCCCGCTCCCTGCTGCTCACCCTCGAGCCGCTCACCGACGACGACGTCCGGGGCCTGCT
GAAGCGCGCCCTCACCGACGAGCGGGGCCTCAAGGGCGCCGTCACCCTCCCCGACGACACCGCGGAACACCTGCTGCGCA
TCGCCGGCGGGGACGCCCGACGCGCGCTCACCGCCCTCGAGGCCGCCGCGGGCGCCGCGCTGGACAAGGGCGAGGCCGAG
GTGAGCCTGGCGACCCTGGAGGAGACGGTCGACCGGGCCGCCGTGAAGTACGACCGCGACGGCGACCAGCACTACGACGT
CGCCAGCGCCCTGATCAAGTCGATCCGCGGCTCGGACGTGGACGCGGCCCTGCACTACCTGGCCCGCATGATCGAGGCAG
GGGAGGACCCCCGCTTCATCGCCCGCCGGCTGATGATCTCCGCCAGCGAGGACATCGGCCTCGCCGACCCGAACGCCCTG
CAGATCGCGGTCGCCGCCGCCCAGGCCGTCGCCATGATCGGCTTCCCCGAGGCCGCGCTCACCCTCAGCCACGCCACCAT
CGCCCTCGCGCTCGCCCCCAAGTCCAACGCGGCCACCACCGCGATCGGCGCCGCCCTGGAGGACGTCCGCAAGGGACTGG
CCGGCCCGGTCCCCTCCCATCTCCGCGACAGCCACTACAAGGGCGCCGGCAAGCTCGGCCACGGCAAGGGCTACACCTAC
CCGCACGACCTGCCCGAGGGCATCGCCGCCCAGCAGTACGCCCCGGACGCCCTGAAGGACCGCGAGTACTACGAGCCCAC
CCGGCACGGCGCCGAGGCGCGGTACGCGGACGCGGTGGAGTGGACCAGGAAGCACCTCGGTCGCAAGCGGTCCTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-441)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

• AAA C-terminal domain (AAA_assoc_2) (199-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	44.111	96.009	0.424