Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   KIP81_RS08540 Genome accession   NZ_CP075172
Coordinates   1716743..1719079 (-) Length   778 a.a.
NCBI ID   WP_024343554.1    Uniprot ID   -
Organism   Streptococcus equinus strain SheepZ001     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1711743..1724079
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIP81_RS08515 (KIP81_08505) - 1712175..1712672 (+) 498 WP_243602813.1 phosphatase PAP2 family protein -
  KIP81_RS08520 (KIP81_08510) nadC 1712743..1713603 (-) 861 WP_024343558.1 carboxylating nicotinate-nucleotide diphosphorylase -
  KIP81_RS08525 (KIP81_08515) - 1713632..1714936 (-) 1305 WP_243602814.1 L-aspartate oxidase -
  KIP81_RS08530 (KIP81_08520) nadA 1715190..1716110 (+) 921 WP_243602815.1 quinolinate synthase NadA -
  KIP81_RS08535 (KIP81_08525) - 1716186..1716485 (-) 300 WP_231997654.1 bacteriocin immunity protein -
  KIP81_RS08540 (KIP81_08530) mutS/mutS2 1716743..1719079 (-) 2337 WP_024343554.1 endonuclease MutS2 Machinery gene
  KIP81_RS08545 (KIP81_08535) - 1719193..1719735 (-) 543 WP_243602816.1 CvpA family protein -
  KIP81_RS08550 (KIP81_08540) - 1719741..1720049 (-) 309 WP_004233227.1 hypothetical protein -
  KIP81_RS08555 (KIP81_08545) rnhC 1720170..1721069 (+) 900 WP_243602817.1 ribonuclease HIII -
  KIP81_RS08560 (KIP81_08550) lepB 1721085..1721678 (+) 594 WP_243602818.1 signal peptidase I -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87693.05 Da        Isoelectric Point: 6.6163

>NTDB_id=497438 KIP81_RS08540 WP_024343554.1 1716743..1719079(-) (mutS/mutS2) [Streptococcus equinus strain SheepZ001]
MNNRILEQLEFDKVKQLFAGYLQTEQGQEELRKLSPMTEPDRISRSFDEMSDMEQIFIEQHGFGLGSLRDISESMRRLEL
DADVNVSEIIDIKKILQVSAEVKHFYNDLENVELHALNNLFEKIELLPSLQGSLQAINDGGFIENFASHELDRIRRQINH
DESRVRQVLQDILKKQADHLTETLIASRNGRAVLPVKNSYRNRISGVVHDISASGSTVYIEPRAVVQLNEEITQLRADER
HEMARILRELSNMLRPHTNIIRNNAWVLGHLDFVRAKFLFMQENKAVVPQLSTDKTVQLLQARHPLLTNPIANDLHFLDE
LTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSKVAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVDILAAAD
KDSLVLVDELGAGTDPQEGASLAISILEHLRLTQVKTMATTHYPELKAYGIETEFVENASMEFDTETLSPTYHFMQGVPG
RSNAFEIARRLGLAEVIVNEAERLTDSDTDVNRIIERLEEQTHESRKRLDHIKEVEQDNLKFNRAVKKLYNEFSHAKDKE
LEKASAKAQEIVDKAMAESEEILKNLHHKASLKPHEVIEAKSQLKKLAPEVDLSKNKVLKKAKKLRAPRVGDDIIVTAYG
QRGTLINQTKNGKWEAQVGLIKMTLKEDEFSLVKVQEEAQKPKKKQVHVVKKSKKSAGPRARLDLRGKRYEEAMQELDEF
IDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGSGCTIANLG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=497438 KIP81_RS08540 WP_024343554.1 1716743..1719079(-) (mutS/mutS2) [Streptococcus equinus strain SheepZ001]
ATGAATAACAGAATTTTAGAACAGTTAGAATTTGATAAGGTCAAGCAACTTTTTGCTGGCTATTTACAAACTGAGCAAGG
GCAGGAGGAATTACGTAAACTTTCTCCAATGACTGAACCAGATCGTATCTCACGTTCATTTGATGAAATGTCTGATATGG
AGCAGATTTTCATTGAGCAACATGGATTTGGTCTTGGCAGTTTGCGTGATATTTCTGAAAGTATGCGTCGCTTAGAATTG
GATGCTGATGTTAACGTTTCAGAGATTATCGACATCAAAAAAATCTTGCAAGTTTCTGCAGAAGTTAAACATTTTTACAA
TGATTTAGAAAATGTCGAGCTGCATGCGCTCAATAATCTTTTTGAAAAAATCGAACTTTTACCAAGTCTGCAAGGTAGTC
TTCAAGCTATCAACGATGGCGGTTTTATTGAAAATTTTGCAAGTCATGAACTTGACCGTATTCGTCGTCAAATCAATCAT
GATGAAAGCCGCGTGCGTCAAGTCTTGCAAGATATTTTGAAAAAGCAAGCTGACCATTTGACAGAGACTTTGATTGCAAG
CCGTAATGGTCGTGCAGTTTTACCTGTGAAAAATAGCTACCGCAATCGTATTTCAGGGGTTGTGCATGATATTTCAGCAT
CAGGAAGCACTGTTTATATTGAACCACGCGCCGTTGTCCAATTAAACGAAGAAATCACGCAATTGCGCGCAGATGAACGT
CATGAAATGGCACGTATTTTGCGTGAGTTGTCAAATATGCTTCGTCCACATACTAATATTATTCGCAACAATGCTTGGGT
TCTAGGACACTTGGATTTTGTACGTGCAAAATTCCTTTTCATGCAAGAAAACAAAGCAGTCGTTCCACAATTATCCACAG
ATAAGACCGTTCAACTCTTACAAGCTCGTCACCCGCTGTTGACAAATCCTATCGCAAATGACCTTCATTTCCTTGATGAA
TTGACCGTCATTGTCATCACTGGTCCAAATACTGGTGGTAAGACGGTTATGTTGAAAACTTTGGGATTAGCGCAGCTTAT
GGCACAATCAGGACTTCCAATCCTAGCTGACAAGGGTAGTAAAGTCGCTGTTTTCAATGAGATTTTCGCTGATATCGGTG
ATGAGCAATCTATCGAGCAAAGTTTGTCAACATTCTCAAGCCACATGACAAATATTGTGGATATCTTGGCAGCAGCTGAC
AAAGATAGTTTGGTACTTGTGGATGAATTGGGGGCAGGTACTGACCCGCAAGAAGGAGCTAGCCTTGCCATTTCAATCTT
GGAGCATTTGCGTTTGACACAAGTGAAAACCATGGCAACAACTCACTATCCTGAACTAAAAGCTTACGGTATCGAGACAG
AGTTTGTTGAAAATGCCAGCATGGAATTTGACACAGAGACTTTGAGCCCGACTTATCATTTCATGCAAGGTGTGCCAGGA
CGCTCAAATGCCTTTGAAATCGCTCGTCGTTTAGGTCTTGCAGAAGTGATTGTCAACGAAGCAGAGCGTTTGACGGATTC
TGATACGGACGTTAACCGCATCATCGAACGTTTGGAAGAACAAACGCATGAAAGTCGTAAACGTCTTGACCATATCAAAG
AAGTTGAACAAGATAACCTTAAATTCAATCGTGCAGTTAAGAAACTTTACAATGAATTTTCACATGCAAAAGACAAAGAA
CTTGAAAAAGCTTCTGCTAAGGCACAAGAAATTGTGGATAAAGCCATGGCTGAAAGTGAAGAAATCCTTAAAAATCTTCA
CCACAAAGCAAGTCTTAAACCACACGAAGTCATTGAAGCTAAAAGTCAGTTGAAAAAATTGGCACCTGAAGTTGATTTGT
CGAAAAATAAAGTTCTTAAGAAAGCTAAGAAATTGCGCGCACCGCGCGTGGGTGATGATATTATCGTCACAGCTTATGGT
CAACGTGGAACCTTGATCAACCAAACGAAAAACGGTAAATGGGAAGCGCAAGTTGGTCTCATTAAGATGACGCTTAAAGA
AGATGAATTTAGCCTTGTCAAAGTTCAAGAAGAAGCGCAAAAACCTAAGAAAAAACAAGTCCATGTGGTTAAGAAAAGCA
AGAAATCTGCTGGACCACGTGCCCGACTTGACCTTCGTGGTAAACGTTATGAAGAAGCCATGCAAGAATTGGACGAATTT
ATCGACCAAGCCTTGCTTAATAACATGGCTCAAGTTGATATCATTCACGGTATCGGAACAGGTGTTATCCGTGAAGGGGT
CACAAAATACCTTCGTCGCAACAAGCACGTCAAATCATTCGGCTACGCCCCACAAAACGCAGGTGGCAGTGGCTGTACCA
TCGCAAACCTTGGTTAA

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(630-669)

Smr domain (Smr)

(703-776)

MutS domain V (MutS_V)

(324-505)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

41.646

100

0.423