Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   IRE31_RS08885 Genome accession   NZ_CP063829
Coordinates   1732955..1733776 (-) Length   273 a.a.
NCBI ID   WP_000601671.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 19A-ST320_99-176     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1727955..1738776
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRE31_RS08840 (IRE31_08805) - 1728447..1728764 (-) 318 WP_000615767.1 thioredoxin family protein -
  IRE31_RS08845 (IRE31_08810) - 1728761..1729060 (-) 300 WP_001815024.1 DUF4651 domain-containing protein -
  IRE31_RS08850 - 1729154..1729285 (+) 132 WP_001811306.1 hypothetical protein -
  IRE31_RS08855 (IRE31_08815) - 1729310..1729507 (-) 198 Protein_1734 N-acetylmuramoyl-L-alanine amidase family protein -
  IRE31_RS08860 (IRE31_08820) - 1729750..1730424 (-) 675 WP_000725707.1 hypothetical protein -
  IRE31_RS08865 (IRE31_08825) - 1730429..1730875 (-) 447 WP_000776589.1 LytTR family DNA-binding domain-containing protein -
  IRE31_RS08870 (IRE31_08830) - 1730989..1731492 (-) 504 WP_000800942.1 phosphatase PAP2 family protein -
  IRE31_RS08875 (IRE31_08835) - 1731489..1731851 (-) 363 WP_000078804.1 DUF2200 domain-containing protein -
  IRE31_RS08880 - 1731917..1732762 (-) 846 Protein_1739 ATP-binding cassette domain-containing protein -
  IRE31_RS08885 rcrP 1732955..1733776 (-) 822 WP_000601671.1 ABC transporter permease Regulator
  IRE31_RS08890 (IRE31_08845) - 1733793..1734264 (-) 472 Protein_1741 MarR family winged helix-turn-helix transcriptional regulator -
  IRE31_RS08895 (IRE31_08850) - 1734388..1735104 (-) 717 WP_000532876.1 YebC/PmpR family DNA-binding transcriptional regulator -
  IRE31_RS08900 (IRE31_08855) ply 1735985..1737400 (-) 1416 WP_001284361.1 cholesterol-dependent cytolysin pneumolysin -
  IRE31_RS08905 (IRE31_08860) - 1737411..1737821 (-) 411 WP_000595763.1 hypothetical protein -
  IRE31_RS08910 (IRE31_08865) - 1737814..1738422 (-) 609 WP_000083614.1 hypothetical protein -

Sequence


Protein


Download         Length: 273 a.a.        Molecular weight: 30652.35 Da        Isoelectric Point: 5.9310

>NTDB_id=496927 IRE31_RS08885 WP_000601671.1 1732955..1733776(-) (rcrP) [Streptococcus pneumoniae strain 19A-ST320_99-176]
MILLAILFTCFLVYLELEVPTYISKITDLLGSQETNLDELWQPASMMMGMSFLAFLSVVAVGFFASRVAASYISRLRSDI
FNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQMLITMGLQVVTRGPIMAIWAIGKILGHSEYWLWAVLVVVIVNVLMTTV
LMTLAFPKQSLIQGLTDKLNSITRESLTGIRVVRAYNAEDYQNEKFAAVNDELTRLNLFVNRLMAILNPIMMGISSGLSV
AIYWIGAYVINDAAPIARLPLFSDMIIFMSYAM

Nucleotide


Download         Length: 822 bp        

>NTDB_id=496927 IRE31_RS08885 WP_000601671.1 1732955..1733776(-) (rcrP) [Streptococcus pneumoniae strain 19A-ST320_99-176]
ATGATTTTACTAGCCATTCTCTTTACTTGCTTTTTGGTCTATCTAGAGTTGGAAGTGCCGACCTATATCTCGAAAATTAC
GGATTTGCTAGGTAGTCAAGAAACTAATTTAGATGAGTTGTGGCAGCCGGCAAGCATGATGATGGGAATGTCCTTTCTTG
CCTTCTTGTCCGTAGTTGCAGTTGGATTTTTTGCATCCCGAGTGGCGGCTTCTTATATTAGTAGGCTGAGAAGTGATATT
TTTAACCGAGTTTTGGATTACTCGCAGACAGAGATTAAGAAATTTTCAATTCCTAGCCTCTTGACGCGTACTACCAATGA
CATTACTCAAGTTCAAATGTTGATTACTATGGGCTTGCAAGTGGTAACGCGTGGTCCAATTATGGCTATCTGGGCTATTG
GGAAGATTTTAGGTCATTCAGAATACTGGCTCTGGGCCGTACTTGTGGTAGTGATTGTCAACGTCCTGATGACGACCGTT
TTGATGACGCTAGCCTTTCCAAAACAGTCCTTGATTCAGGGGTTGACAGATAAACTGAACAGTATCACTCGTGAGAGTTT
AACAGGTATTCGTGTCGTTCGTGCCTACAATGCAGAGGATTATCAAAATGAAAAATTTGCAGCAGTAAATGATGAATTGA
CCCGTTTGAATTTGTTTGTCAACCGTCTTATGGCTATTTTGAATCCTATCATGATGGGGATTTCAAGTGGTTTGAGTGTA
GCGATTTACTGGATTGGGGCCTATGTGATTAACGACGCTGCTCCGATAGCGCGTCTGCCTCTCTTTAGTGACATGATTAT
TTTCATGTCTTATGCCATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

56.842

100

0.593