Detailed information NTG0494703

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: INQ56_RS12465
• Genome accession: NZ_CP063360
• Coordinates: 2414718..2417102 (-)
• Length: 794 a.a.
• NCBI ID: WP_193803762.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain BIM B-263
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2409718..2422102

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
INQ56_RS12430 (INQ56_12430)	-	2410822..2411549 (+)	728	Protein_2416	amino acid ABC transporter ATP-binding protein	-
INQ56_RS12435 (INQ56_12435)	-	2411564..2412373 (+)	810	WP_193803754.1	transporter substrate-binding domain-containing protein	-
INQ56_RS12440 (INQ56_12440)	-	2412454..2413107 (+)	654	WP_193803756.1	amino acid ABC transporter permease	-
INQ56_RS12445 (INQ56_12445)	-	2413123..2413773 (+)	651	WP_008342693.1	amino acid ABC transporter permease	-
INQ56_RS12450 (INQ56_12450)	-	2413812..2413943 (-)	132	WP_193803758.1	YrzQ family protein	-
INQ56_RS12455 (INQ56_12455)	-	2413964..2414155 (-)	192	WP_003216308.1	hypothetical protein	-
INQ56_RS12460 (INQ56_12460)	-	2414169..2414627 (-)	459	WP_193803760.1	PRC-barrel domain-containing protein	-
INQ56_RS12465 (INQ56_12465)	recD2	2414718..2417102 (-)	2385	WP_193803762.1	ATP-dependent RecD-like DNA helicase	Machinery gene
INQ56_RS12470 (INQ56_12470)	-	2417122..2417775 (-)	654	WP_041506815.1	tetratricopeptide repeat protein	-
INQ56_RS12475 (INQ56_12475)	mnmA	2417837..2418955 (-)	1119	WP_008342709.1	tRNA 2-thiouridine(34) synthase MnmA	-
INQ56_RS12480 (INQ56_12480)	-	2419051..2420193 (-)	1143	WP_008342711.1	cysteine desulfurase family protein	-
INQ56_RS12485 (INQ56_12485)	cymR	2420212..2420631 (-)	420	WP_008342713.1	cysteine metabolism transcriptional regulator CymR	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 88952.41 Da
• Isoelectric Point: 5.1060

>NTDB_id=494703 INQ56_RS12465 WP_193803762.1 2414718..2417102(-) (recD2) [Bacillus altitudinis strain BIM B-263]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHQIMRDPSVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPDRIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKDMIIEDERCYHPSLFYAEQSVAKRIQKIVAQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPGDYKKDE
AFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEDQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAIPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIKCSADQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLTETEEIMDAELAALQKELPFSVHDANIGMEGITPFDFMQE

Nucleotide

• Length: 2385 bp

>NTDB_id=494703 INQ56_RS12465 WP_193803762.1 2414718..2417102(-) (recD2) [Bacillus altitudinis strain BIM B-263]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAAGATGAACCGTTTTTAAAAGGGACGGTTCAAGCCGTTATTTTCCATAA
CGAAAGTAATTTATACTCTGTGTTAAAAGTAAAAGTCATTGAAACATCAGAGAATTTAGAGGAAAAGACAGCATCTGTCA
CAGGGTACTTCCCAGCGCTTCATGAGGAGGAAACCTACACCTTCTATGGCAAGGTCACAAGTCATCCGAAGTTTGGCGAG
CAGTTTCAAGCCACTCATTTTCAAAAGGAAGTCCCTACAACAAAGCAAGGCATCATTCATTATCTCTCTAGTGACTTGTT
TGAAGGGATTGGAAAAAAGACGGCGGAAGAAATCGTCGGCAAGCTTGGCAATCAGACGCTTCATCAAATTATGCGTGATC
CGTCTGTGTTGTATGACGTCCCTCGCCTGTCAAAAAAGAAGGCCGATAAGCTGGCTGCCGCACTTCAAGAGCATCAAGGG
CTTGAGCAAATCATGATCAGCCTGAATCAATATGGTTTTGGTCCTCAGCTTAGCATGAAGATTTACCAAGTATACGAGAG
TGAAACGTTGCAGAAAATTGAAGAAAATCCTTATCAGCTCGTCAAAGACGTCGAGGGGATTGGATTTATTAAAGCAGATG
AACTCGGCGCTAGAACAGGGATATCTGGAAATGATCCAGACCGCATTCGTGCAGCTCTTTTGTATACCGTTGAGACAGCA
AGCCTGCAGGACGGTCATACGTACATACAAACGAAAGATCTGATTGTCGAGACCCGTAAACTGCTGAATCAAACCGGCAA
TGACTACAAAGTGACTGAAATGGACGTTGCCAATCAGATCATTGCACTTGGTGAAGGGAAAGACATGATTATTGAAGATG
AGCGCTGTTATCATCCGTCGCTCTTTTATGCGGAGCAAAGTGTGGCAAAACGCATTCAAAAAATTGTCGCTCAAACGGAA
TATGCAGATCAATTTCCTGAATCAGAATTTCTGCTTGCACTCGGTGAACTGGAGGAACGGCTTGGTGTCCAGTATGCACC
AACCCAAAAAGAAGCCATTCAAAAGGCACTCATGTCTCCAATGCTGCTTTTAACAGGCGGACCGGGTACAGGGAAAACGA
CGGTCATTAAAGGGATTGTCGAGCTTTACAGCGATCTTCACGGCGTATCTCTTGACCCGGGTGATTATAAAAAAGATGAA
GCATTTCCGTTCGTGCTTGCCGCACCAACTGGACGTGCTGCGAAACGAATGACAGAATCCACTGGACTTCCTGCTGTGAC
CATTCACCGGTTGCTAGGCTGGAATGGATCAGAAGGCTTCTCACATGATGAAGACCAGCCGATTGAAGGAAAACTTGTCA
TCATTGATGAATCGAGTATGCTGGATATTTGGCTGGCGAACCATTTGTTTAAGGCGATCCCAGATCATATTCAAGTCATT
ATGGTTGGAGACGAACATCAACTTCCATCTGTCGGACCTGGTCAAGTGTTAAGAGACCTGCTTGCGTCACAAGCTATACC
GGCAGTGACACTAACTGATATTTACCGGCAGGCAGACGGTTCCACAATTGTTGAGCTTGCGCATGATATGAAAAATGGCG
TCCTGCCAAAAGATATTACTGCACGTTCAAAAGACCGATCCTTTATAAAATGCTCAGCTGATCAAATGAAAGAAGTCATT
GAGAAAGTCGTCAGCAATGCTGCTCAAAAAGGCTATTCAGCTAAAGACATTCAGGTACTTGCGCCCATGTATAAAGGAAA
AGCAGGCATTAATGAGCTCAATAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAGGGCAGAGAAATCCCGTTTG
GTGATGTGGTGTACCGGACCGGTGATAAAGTGCTTCAGCTTGTGAATCAGCCGGAGAATAATATTTTTAACGGTGATATT
GGCGAAATTGTCTCGATCTTTTATGCGAAAGAAAACACGGAAAAAGAAGATATGGCGGTCATCTCCTTTGATGGAAATGA
AATCACGTTTACGAAAAAAGATTTTCATCAATTTACACACGCTTATTGTTGCTCGATTCATAAATCCCAGGGCAGTGAAT
TCCCAATCGTGGTGCTGCCAGTCGTTAGAAGTTATTATCGAATGCTTCGAAGAAATTTGCTTTACACGGCCATTACACGA
AGTAAAAAGTTTTTAATTTTGTGCGGCGAGGAATCAGCATTAGAGTGGGGCGTGAAAAATAATGAAGACTCCCTCAGACA
AACATCTTTAACCATGCGTCTTACTGAAACGGAAGAAATCATGGACGCTGAGCTAGCAGCCCTCCAAAAAGAACTTCCTT
TCAGCGTACACGATGCCAATATTGGCATGGAGGGAATCACCCCGTTTGATTTTATGCAAGAGTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (345-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80	100	0.801