Detailed information NTG0049465

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: SALIVA_RS04790
• Genome accession: NC_017595
• Coordinates: 988129..989010 (+)
• Length: 293 a.a.
• NCBI ID: WP_014634406.1
• Uniprot ID: -
• Organism: Streptococcus salivarius JIM8777
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 983129..994010

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SALIVA_RS04765 (SALIVA_0975)	-	983661..985082 (+)	1422	WP_014634404.1	DUF4832 domain-containing protein	-
SALIVA_RS04770 (SALIVA_0976)	galE	985097..986110 (+)	1014	WP_014634405.1	UDP-glucose 4-epimerase GalE	-
SALIVA_RS04775 (SALIVA_0977)	-	986302..986538 (+)	237	WP_013990686.1	DUF1146 family protein	-
SALIVA_RS04780 (SALIVA_0978)	murA	986606..987877 (+)	1272	WP_013990685.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
SALIVA_RS04785 (SALIVA_0979)	-	987879..988067 (+)	189	WP_013990684.1	DNA-directed RNA polymerase subunit beta	-
SALIVA_RS04790 (SALIVA_0980)	endA	988129..989010 (+)	882	WP_014634406.1	DNA/RNA non-specific endonuclease	Machinery gene
SALIVA_RS04795 (SALIVA_0981)	-	989087..989737 (-)	651	WP_014634407.1	amino acid ABC transporter permease	-
SALIVA_RS04800 (SALIVA_0982)	-	989749..990447 (-)	699	WP_014633207.1	amino acid ABC transporter permease	-
SALIVA_RS04805 (SALIVA_0983)	-	990465..991298 (-)	834	WP_014634408.1	transporter substrate-binding domain-containing protein	-
SALIVA_RS04810 (SALIVA_0984)	-	991310..992077 (-)	768	WP_002884172.1	amino acid ABC transporter ATP-binding protein	-
SALIVA_RS04815 (SALIVA_0985)	-	992268..992918 (-)	651	WP_014634409.1	amino acid ABC transporter permease	-
SALIVA_RS04820 (SALIVA_0986)	-	992930..993628 (-)	699	WP_014633207.1	amino acid ABC transporter permease	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31506.09 Da
• Isoelectric Point: 10.2177

>NTDB_id=49465 SALIVA_RS04790 WP_014634406.1 988129..989010(+) (endA) [Streptococcus salivarius JIM8777]
MAKRKTSLTNKQKRQLVSLLIAVLIAVLGYIGTSNKLSPNNPIKQVASLVSGKSNNSAKSNGSTSGQSTPQEQLAETVMT
SSVKSQLGNTIEWNGAGAYIVNGNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVHNLSGEYSHAVDRGHLLGYALVGGLKGFDASTSNPENIAVQTAWANQANSETSTGQNYYESLVRKAQDKNKRVR
YRVTLIYEGDNLIPSGSHLEAKSADGSLEFNVFVPNVQQGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=49465 SALIVA_RS04790 WP_014634406.1 988129..989010(+) (endA) [Streptococcus salivarius JIM8777]
ATGGCAAAAAGAAAGACATCTTTAACAAATAAACAGAAACGTCAGCTAGTCTCGTTACTAATAGCGGTTTTGATTGCAGT
TTTAGGTTACATTGGAACGAGTAATAAGCTCTCACCTAACAATCCAATCAAGCAGGTAGCTAGTCTAGTCTCGGGAAAAT
CCAATAACTCCGCCAAATCAAACGGCTCAACAAGTGGGCAGTCTACGCCACAAGAGCAGCTCGCTGAGACAGTGATGACC
AGCTCCGTCAAGAGTCAACTAGGAAACACCATAGAATGGAATGGGGCAGGAGCTTATATTGTTAACGGTAATAAAACCAA
TCTTAATGCTAAGGTATCTAGCCAACCCTACGCTAATAACCAAGTCAAAACAGTTCAAGGACAAACGGTTCCTACAGTTG
CGAATGCCTTGTTAAGTAAAGCGACCAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGCTCAACTTCTTGGACACCA
GCTGGATGGCATCAAGTTCACAATCTTTCAGGAGAGTATAGCCATGCCGTAGACCGAGGTCATTTGTTAGGTTATGCTCT
AGTAGGTGGTCTTAAAGGATTTGATGCCTCGACTTCAAATCCAGAAAATATTGCCGTTCAAACTGCTTGGGCTAACCAAG
CTAATAGTGAAACTTCCACAGGCCAAAACTATTATGAAAGCCTGGTACGAAAAGCTCAGGATAAAAACAAACGTGTCCGT
TACCGCGTTACCCTCATTTATGAAGGAGATAACCTGATTCCATCAGGATCACATCTTGAAGCCAAGTCAGCTGATGGCTC
GCTTGAGTTCAACGTCTTCGTTCCAAATGTCCAACAGGGAATTACCCTAGATTATTATTCAGGGAAAGTAACGGTGAATT
AA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (99-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	70.356	86.348	0.608
endA	Streptococcus pneumoniae D39	70.356	86.348	0.608
endA	Streptococcus pneumoniae R6	70.356	86.348	0.608
endA	Streptococcus pneumoniae TIGR4	70.356	86.348	0.608