Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   SSAL_RS07985 Genome accession   NC_017594
Coordinates   1731822..1733600 (-) Length   592 a.a.
NCBI ID   WP_014633538.1    Uniprot ID   -
Organism   Streptococcus salivarius 57.I     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1726822..1738600
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSAL_RS07955 (Ssal_01756) frr 1726858..1727415 (-) 558 WP_002886708.1 ribosome recycling factor -
  SSAL_RS07960 (Ssal_01757) pyrH 1727430..1728167 (-) 738 WP_002885551.1 UMP kinase -
  SSAL_RS07965 (Ssal_01758) - 1728404..1729627 (-) 1224 WP_014633534.1 HAMP domain-containing sensor histidine kinase -
  SSAL_RS07970 (Ssal_01760) - 1729641..1730318 (-) 678 WP_014633535.1 response regulator transcription factor -
  SSAL_RS07975 (Ssal_01761) - 1730320..1730943 (-) 624 WP_014633536.1 GTP pyrophosphokinase family protein -
  SSAL_RS07980 (Ssal_01762) - 1731091..1731714 (-) 624 WP_045001906.1 GNAT family N-acetyltransferase -
  SSAL_RS07985 (Ssal_01763) rcrQ 1731822..1733600 (-) 1779 WP_014633538.1 ABC transporter ATP-binding protein Regulator
  SSAL_RS07990 (Ssal_01764) rcrP 1733590..1735404 (-) 1815 WP_014633539.1 ABC transporter ATP-binding protein Regulator
  SSAL_RS07995 (Ssal_01765) rcrR 1735408..1735851 (-) 444 WP_002885568.1 MarR family transcriptional regulator Regulator
  SSAL_RS08000 (Ssal_01766) - 1736038..1736448 (-) 411 WP_014633541.1 peptide deformylase -
  SSAL_RS08005 (Ssal_01767) - 1736608..1737771 (-) 1164 WP_252866508.1 hypothetical protein -

Sequence

Protein


Download         Length: 592 a.a.        Molecular weight: 65154.14 Da        Isoelectric Point: 5.1159

>NTDB_id=49418 SSAL_RS07985 WP_014633538.1 1731822..1733600(-) (rcrQ) [Streptococcus salivarius 57.I]
MENKPKTSSYKRLKPYIKGFQIPFVLAIFGAIISAVITVIGPDKLKEITNTITEGITPTKMGTIPGIDLDKVASIAMTLA
VLYAISAIVGYLQSFTVATVTQRFSQRFRTAIQKKINSVPLNYFDSHSQGDTLSRVTNDVDLLGQSLSQGLGTLITSSIL
LVAAIIMMFYSNVTMAFTAIGSVLIGFVLVAFIMGFSQPLFKRQQENLANINGYIEEIYTGQAVVTSYNASEESSQAFKG
LNDKLYKSMWQSQFISGIMMPLMIFIGNFGYVMVCLVGAIKVIDGSLTIGDVVAFMTYVRIFSQPLSQIAQGITQLQSAT
AAIGRIFEFLEEKDMDDESGKTAELTDTKGQVVFDHVSFGYTPEKTIIHDFSALAKPGQKIAIVGPTGAGKTTIVNLLMK
FYNIDQGRITIDGVDTNDMKRETVHDQFSMVLQDTWLFEGTIRENLIYNQENISDKQVIAAAKAVGVHHFITTLPKGYDT
YLDDSVTMSVGQKQLLTIARALLKDASLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKD
GNIIEQGNHDELMAADGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1779 bp        

>NTDB_id=49418 SSAL_RS07985 WP_014633538.1 1731822..1733600(-) (rcrQ) [Streptococcus salivarius 57.I]
ATGGAAAATAAGCCAAAAACATCATCCTATAAACGCTTAAAACCCTATATTAAAGGTTTCCAAATTCCGTTTGTCCTTGC
GATTTTTGGAGCAATTATTTCAGCGGTCATTACAGTTATTGGACCAGATAAGCTTAAAGAAATTACCAATACTATTACTG
AAGGGATTACACCTACTAAAATGGGAACGATTCCAGGCATTGATTTGGACAAGGTAGCAAGTATTGCTATGACCTTGGCT
GTTCTCTATGCCATTTCAGCGATTGTGGGTTACTTACAAAGCTTTACGGTTGCGACGGTTACACAACGTTTTTCACAACG
TTTTCGTACAGCTATCCAAAAGAAAATCAACAGTGTTCCCCTTAATTATTTTGACAGTCATTCTCAAGGGGACACCCTCT
CTCGTGTGACTAATGACGTTGACCTTTTGGGACAATCTCTTAGTCAAGGTTTGGGTACCCTAATTACTTCAAGTATTCTC
TTGGTCGCAGCCATTATTATGATGTTTTACTCAAATGTCACTATGGCTTTCACTGCTATTGGTTCTGTCTTGATAGGATT
TGTTCTAGTAGCCTTCATCATGGGTTTCTCACAACCCCTTTTCAAACGTCAACAAGAAAATTTGGCTAACATTAATGGAT
ATATTGAAGAAATCTACACAGGTCAAGCAGTTGTAACGAGTTACAATGCATCTGAAGAAAGTAGTCAAGCTTTCAAGGGG
CTTAATGATAAGCTCTATAAATCGATGTGGCAATCTCAGTTTATCTCAGGTATTATGATGCCACTTATGATTTTCATTGG
GAACTTTGGTTACGTCATGGTCTGTCTTGTGGGAGCTATTAAGGTTATTGATGGTAGCTTGACTATTGGTGATGTGGTAG
CCTTCATGACTTATGTTCGTATTTTCTCACAACCTCTTTCTCAAATTGCACAAGGGATTACACAGCTCCAGTCAGCCACT
GCAGCTATTGGTCGTATCTTTGAATTTTTGGAAGAAAAAGATATGGATGACGAATCAGGTAAGACAGCTGAATTGACAGA
TACTAAAGGTCAAGTTGTCTTTGATCATGTTTCCTTTGGTTATACTCCTGAAAAGACTATTATTCATGATTTTTCAGCTC
TTGCTAAGCCAGGTCAAAAGATTGCGATTGTTGGTCCAACAGGTGCTGGTAAGACGACTATTGTTAACCTGCTTATGAAG
TTCTATAACATCGACCAAGGTCGTATCACCATTGACGGTGTGGATACCAACGACATGAAACGTGAAACCGTTCATGATCA
ATTCTCTATGGTGCTTCAAGACACTTGGCTTTTTGAAGGTACTATTCGTGAAAATTTGATTTACAACCAAGAGAATATTT
CTGACAAGCAAGTTATTGCTGCAGCTAAGGCTGTCGGTGTTCACCACTTCATCACCACACTTCCAAAAGGTTATGATACT
TATTTGGATGATTCTGTGACCATGTCAGTTGGTCAGAAACAGCTCTTGACCATTGCGCGTGCGCTTCTTAAGGATGCCTC
TCTTCTTATCTTGGATGAAGCGACATCATCAGTTGATACCCGAACAGAAGAATTGATTCAAAAAGCCATGGACAAGCTTA
TGGAAGGTCGGACTTCCTTTGTCATTGCCCACCGCTTATCAACCATTCGAAATGCTGACCTTATCCTTGTGATGAAAGAT
GGTAACATTATTGAACAGGGCAATCATGATGAGCTCATGGCAGCAGATGGTTTCTATGCTGATCTTTATAATAGTCAATT
TACAGAAGAAGTTGCCTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(371-516)

ABC transporter transmembrane region (ABC_membrane)

(25-306)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

68.75

100

0.688

Multiple sequence alignment