Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   A0071_RS03365 Genome accession   NZ_CP063091
Coordinates   680397..680912 (+) Length   171 a.a.
NCBI ID   WP_027305003.1    Uniprot ID   A0A1W6BUM8
Organism   Campylobacter cuniculorum strain 2010D-8469     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 675397..685912
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A0071_RS03340 (A0071_03340) - 675862..676197 (+) 336 WP_027304998.1 hypothetical protein -
  A0071_RS03345 (A0071_03345) - 676207..676935 (+) 729 WP_027304999.1 phosphatidate cytidylyltransferase -
  A0071_RS03350 (A0071_03350) dxr 676932..677999 (+) 1068 WP_027305000.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  A0071_RS03355 (A0071_03355) - 677996..679390 (+) 1395 WP_027305001.1 M99 family carboxypeptidase catalytic domain-containing protein -
  A0071_RS03360 (A0071_03360) tsaD 679387..680394 (+) 1008 WP_027305002.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  A0071_RS03365 (A0071_03365) ctsG 680397..680912 (+) 516 WP_027305003.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  A0071_RS03370 (A0071_03370) - 680909..682194 (+) 1286 Protein_667 DUF2920 family protein -
  A0071_RS03375 (A0071_03375) - 682329..682616 (+) 288 WP_197548247.1 hypothetical protein -
  A0071_RS03380 (A0071_03380) - 682600..683379 (+) 780 WP_027306040.1 alginate O-acetyltransferase AlgX-related protein -
  A0071_RS03410 (A0071_03410) flgB 684636..685070 (+) 435 WP_027306041.1 flagellar basal body rod protein FlgB -
  A0071_RS03415 (A0071_03415) flgC 685080..685610 (+) 531 WP_027306042.1 flagellar basal body rod protein FlgC -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18484.45 Da        Isoelectric Point: 7.1349

>NTDB_id=492863 A0071_RS03365 WP_027305003.1 680397..680912(+) (ctsG) [Campylobacter cuniculorum strain 2010D-8469]
MKKAFTILELVFVIIILGILAAIALPQFGSSKDEAEISKSLNNLRTLVNDINIYALKNDALNSIKIMSNVSGVANVNPNN
ANIQAGFKVGDDEECVKLVFIHKADFVMMGISSNDNVKNALETIANGGDKELLDRIDFTSTSHNKSCVALSKKENFKALA
SKIYVLLGALP

Nucleotide


Download         Length: 516 bp        

>NTDB_id=492863 A0071_RS03365 WP_027305003.1 680397..680912(+) (ctsG) [Campylobacter cuniculorum strain 2010D-8469]
ATGAAAAAAGCTTTTACGATTTTAGAACTTGTATTCGTGATTATCATATTAGGCATTTTAGCAGCCATTGCCCTGCCTCA
ATTTGGTTCAAGCAAAGACGAAGCTGAAATCAGTAAAAGCTTAAACAATCTTAGAACCTTAGTCAATGATATTAACATTT
ATGCTTTGAAAAACGATGCTTTAAATTCTATAAAAATAATGAGCAATGTGAGTGGGGTTGCAAATGTTAATCCAAACAAT
GCTAATATACAAGCAGGTTTTAAAGTGGGCGATGATGAGGAGTGTGTTAAGCTTGTTTTTATACACAAGGCTGATTTTGT
TATGATGGGAATTTCAAGCAATGATAATGTAAAAAATGCCCTTGAAACCATCGCAAATGGTGGAGATAAAGAGCTTTTGG
ATAGGATTGATTTTACAAGCACTTCGCACAATAAAAGCTGTGTGGCTTTGAGTAAAAAAGAAAATTTCAAAGCCTTAGCG
AGTAAAATTTATGTCTTATTAGGAGCTTTACCATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1W6BUM8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

63.953

100

0.643