Detailed information
Bioinformatically predicted
Overview
| Name | rcrP | Type | Regulator |
| Locus tag | BL1341_RS08925 | Genome accession | NZ_CP062950 |
| Coordinates | 2030756..2032627 (+) | Length | 623 a.a. |
| NCBI ID | WP_007054106.1 | Uniprot ID | A0A4R0SE98 |
| Organism | Bifidobacterium longum subsp. longum strain JCM 11341 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 1996232..2030569 | 2030756..2032627 | flank | 187 |
Gene organization within MGE regions
Location: 1996232..2032627
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BL1341_RS08825 (BL1341_08825) | - | 1996232..1996945 (+) | 714 | WP_032682922.1 | histidine phosphatase family protein | - |
| BL1341_RS08830 (BL1341_08830) | - | 1997332..1998678 (+) | 1347 | WP_179106346.1 | ABC transporter substrate-binding protein | - |
| BL1341_RS08835 (BL1341_08835) | - | 1998933..1999949 (-) | 1017 | WP_193027141.1 | LacI family DNA-binding transcriptional regulator | - |
| BL1341_RS08840 (BL1341_08840) | - | 2000333..2001187 (+) | 855 | WP_193027143.1 | carbohydrate ABC transporter permease | - |
| BL1341_RS08845 (BL1341_08845) | - | 2001187..2002029 (+) | 843 | WP_007056981.1 | carbohydrate ABC transporter permease | - |
| BL1341_RS08850 (BL1341_08850) | - | 2002088..2002693 (+) | 606 | WP_032734940.1 | YesL family protein | - |
| BL1341_RS08855 (BL1341_08855) | - | 2003046..2006243 (+) | 3198 | WP_193027144.1 | alpha-L-arabinofuranosidase | - |
| BL1341_RS08860 (BL1341_08860) | - | 2006369..2007328 (-) | 960 | Protein_1728 | ISL3 family transposase | - |
| BL1341_RS08865 (BL1341_08865) | - | 2007411..2007686 (+) | 276 | Protein_1729 | transposase | - |
| BL1341_RS08870 (BL1341_08870) | - | 2007828..2009240 (+) | 1413 | WP_193027146.1 | ATP-binding protein | - |
| BL1341_RS08875 (BL1341_08875) | - | 2009303..2010778 (-) | 1476 | WP_193027148.1 | amino acid permease | - |
| BL1341_RS08880 (BL1341_08880) | - | 2011001..2011570 (-) | 570 | WP_007057465.1 | TetR/AcrR family transcriptional regulator | - |
| BL1341_RS08885 (BL1341_08885) | - | 2011714..2012415 (+) | 702 | WP_065443452.1 | ABC transporter ATP-binding protein | - |
| BL1341_RS08890 (BL1341_08890) | - | 2012504..2016187 (+) | 3684 | WP_053496226.1 | FtsX-like permease family protein | - |
| BL1341_RS08895 (BL1341_08895) | - | 2016375..2017898 (+) | 1524 | WP_008783197.1 | amino acid permease | - |
| BL1341_RS08900 (BL1341_08900) | - | 2018238..2019734 (+) | 1497 | WP_065454660.1 | RNA-binding domain-containing protein | - |
| BL1341_RS08905 (BL1341_08905) | - | 2020038..2024579 (+) | 4542 | WP_193027149.1 | exo-beta-1,6-galactobiohydrolase | - |
| BL1341_RS11140 | - | 2025153..2025218 (+) | 66 | WP_349816200.1 | hypothetical protein | - |
| BL1341_RS11145 | - | 2026921..2028627 (+) | 1707 | WP_225090317.1 | bacterial Ig-like domain-containing protein | - |
| BL1341_RS08915 (BL1341_08915) | - | 2029123..2029686 (-) | 564 | WP_007055052.1 | BRO family protein | - |
| BL1341_RS08920 (BL1341_08920) | - | 2030048..2030569 (+) | 522 | WP_041473941.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| BL1341_RS08925 (BL1341_08925) | rcrP | 2030756..2032627 (+) | 1872 | WP_007054106.1 | ABC transporter ATP-binding protein | Regulator |
Sequence
Protein
Download Length: 623 a.a. Molecular weight: 67987.58 Da Isoelectric Point: 5.4567
>NTDB_id=492101 BL1341_RS08925 WP_007054106.1 2030756..2032627(+) (rcrP) [Bifidobacterium longum subsp. longum strain JCM 11341]
MLRIMKYLSKAEIGQMLIALVTIVGQVYFDLKLPDYMSDITTLVETPGSHMKDIWIAGGKMLLISLGSAACAIITGYIAA
RVAASFTQRLRSLEFRKVESFGPAEMSKFSTASLITRSTNDVTQVQMFITMGLQLIVKSPIMAVWAVCKIAGEGFEWTLA
TGIAVVILLAAIVIMMAMVMPKFKAMQALTDNINLVARENLTGLRVVRAYNAEDYQEAKFTKANKDLTDTQLFTNRVMAF
MMPLMNTIMNGLMLAVYWIGTYLIDAAGLKDKLTVFSNMVVFSNYSVQVIMSFLLMSMVFVLWPRADVSAQRIMEVLDTE
PIVENGTKTAADVAKTGQRGTVEFRNVSFTYPDSREAMLEGINFTAEQGQTVAFIGSTGSGKSSLINLVPRFYDTSQGQV
LVDGVDVRDYDLKALRDKIGYVPQQSVLFKGTVASNVSYGDQPGDPAEVEMADTSTPAGRKREAALIAAGKAAEGADIPA
EQLNRVRAAADVAQASEFVARMDGGYSAAIAQGGSNVSGGQKQRLSIARAVYRHPEILIFDDSFSALDFKTDREVRDALA
REAKDSTKLIVAQRIGTIMNADRIVVLDDGKVVGQGTHKELLDNCDVYRQIAESQLSQSELTA
MLRIMKYLSKAEIGQMLIALVTIVGQVYFDLKLPDYMSDITTLVETPGSHMKDIWIAGGKMLLISLGSAACAIITGYIAA
RVAASFTQRLRSLEFRKVESFGPAEMSKFSTASLITRSTNDVTQVQMFITMGLQLIVKSPIMAVWAVCKIAGEGFEWTLA
TGIAVVILLAAIVIMMAMVMPKFKAMQALTDNINLVARENLTGLRVVRAYNAEDYQEAKFTKANKDLTDTQLFTNRVMAF
MMPLMNTIMNGLMLAVYWIGTYLIDAAGLKDKLTVFSNMVVFSNYSVQVIMSFLLMSMVFVLWPRADVSAQRIMEVLDTE
PIVENGTKTAADVAKTGQRGTVEFRNVSFTYPDSREAMLEGINFTAEQGQTVAFIGSTGSGKSSLINLVPRFYDTSQGQV
LVDGVDVRDYDLKALRDKIGYVPQQSVLFKGTVASNVSYGDQPGDPAEVEMADTSTPAGRKREAALIAAGKAAEGADIPA
EQLNRVRAAADVAQASEFVARMDGGYSAAIAQGGSNVSGGQKQRLSIARAVYRHPEILIFDDSFSALDFKTDREVRDALA
REAKDSTKLIVAQRIGTIMNADRIVVLDDGKVVGQGTHKELLDNCDVYRQIAESQLSQSELTA
Nucleotide
Download Length: 1872 bp
>NTDB_id=492101 BL1341_RS08925 WP_007054106.1 2030756..2032627(+) (rcrP) [Bifidobacterium longum subsp. longum strain JCM 11341]
ATGCTTCGCATCATGAAATACCTCTCCAAAGCGGAGATCGGTCAGATGCTCATCGCTCTGGTGACCATCGTCGGGCAGGT
CTACTTCGACCTGAAACTGCCCGACTATATGTCAGACATCACCACGCTGGTCGAAACGCCGGGCAGCCACATGAAGGACA
TTTGGATTGCCGGCGGCAAGATGCTGCTCATCTCGCTCGGATCCGCGGCGTGTGCCATCATCACCGGCTACATCGCTGCG
CGCGTGGCGGCCTCGTTCACCCAGCGTCTGCGCTCGCTCGAATTCCGCAAGGTCGAGTCCTTCGGCCCGGCCGAAATGAG
CAAGTTCTCCACCGCCAGCCTCATCACCCGCTCCACCAACGACGTCACGCAGGTGCAGATGTTCATCACCATGGGTCTGC
AGCTCATCGTCAAATCGCCGATTATGGCAGTATGGGCCGTGTGCAAGATCGCCGGCGAAGGCTTCGAATGGACGCTCGCC
ACCGGAATCGCCGTAGTGATTCTGCTGGCGGCCATCGTCATCATGATGGCCATGGTCATGCCGAAATTCAAGGCCATGCA
GGCCCTGACCGACAACATCAACCTCGTGGCCCGCGAGAACCTCACCGGCCTGCGTGTGGTGCGCGCCTACAACGCCGAGG
ACTACCAGGAAGCCAAATTCACCAAGGCCAACAAGGACCTCACCGACACCCAGCTGTTCACCAACCGCGTCATGGCGTTC
ATGATGCCGCTGATGAACACCATCATGAACGGTCTGATGCTTGCCGTCTACTGGATCGGTACCTACCTGATCGATGCCGC
CGGGCTCAAGGACAAGCTCACCGTGTTCTCCAACATGGTGGTGTTCTCCAACTACTCCGTGCAGGTCATCATGAGCTTCC
TGCTCATGAGCATGGTGTTCGTGCTCTGGCCGCGCGCCGACGTGTCCGCGCAGCGCATCATGGAGGTACTCGACACCGAG
CCGATCGTCGAGAACGGCACCAAAACCGCCGCCGACGTGGCCAAAACCGGTCAGCGAGGCACCGTGGAATTCCGCAACGT
CAGCTTCACCTACCCGGATTCGCGCGAGGCGATGCTGGAAGGCATCAACTTCACCGCCGAGCAGGGCCAGACGGTGGCGT
TCATCGGCTCCACCGGCTCCGGCAAGTCGTCTCTTATCAATCTCGTGCCGCGCTTCTATGACACCAGCCAAGGCCAGGTG
TTGGTCGACGGCGTGGACGTGCGCGACTACGACCTGAAGGCCCTGCGCGACAAGATCGGCTACGTGCCGCAGCAGTCCGT
GCTGTTCAAGGGCACCGTGGCCTCCAACGTGAGCTACGGCGATCAGCCGGGCGACCCGGCGGAGGTCGAGATGGCCGATA
CCTCCACCCCGGCCGGGCGCAAGCGCGAGGCCGCGTTGATCGCCGCTGGCAAGGCTGCGGAAGGTGCCGATATACCGGCC
GAGCAGCTGAATCGCGTCAGGGCCGCCGCCGACGTGGCGCAGGCCAGCGAGTTCGTGGCGCGCATGGACGGCGGGTATTC
CGCCGCGATCGCCCAAGGCGGATCGAACGTGTCCGGCGGCCAGAAGCAGCGCCTGTCGATTGCGCGCGCGGTGTACCGTC
ACCCGGAAATCCTGATTTTCGACGACTCGTTCTCCGCGCTCGACTTCAAGACCGACCGCGAAGTGCGCGACGCGCTCGCC
CGCGAGGCCAAGGATTCCACCAAGCTCATCGTGGCCCAGCGCATCGGCACCATCATGAACGCCGACCGCATCGTCGTGCT
CGACGACGGCAAGGTCGTGGGTCAGGGCACGCACAAGGAACTGCTCGACAACTGCGACGTATACCGCCAGATCGCCGAAT
CCCAGCTCAGCCAGTCGGAGCTTACGGCGTAG
ATGCTTCGCATCATGAAATACCTCTCCAAAGCGGAGATCGGTCAGATGCTCATCGCTCTGGTGACCATCGTCGGGCAGGT
CTACTTCGACCTGAAACTGCCCGACTATATGTCAGACATCACCACGCTGGTCGAAACGCCGGGCAGCCACATGAAGGACA
TTTGGATTGCCGGCGGCAAGATGCTGCTCATCTCGCTCGGATCCGCGGCGTGTGCCATCATCACCGGCTACATCGCTGCG
CGCGTGGCGGCCTCGTTCACCCAGCGTCTGCGCTCGCTCGAATTCCGCAAGGTCGAGTCCTTCGGCCCGGCCGAAATGAG
CAAGTTCTCCACCGCCAGCCTCATCACCCGCTCCACCAACGACGTCACGCAGGTGCAGATGTTCATCACCATGGGTCTGC
AGCTCATCGTCAAATCGCCGATTATGGCAGTATGGGCCGTGTGCAAGATCGCCGGCGAAGGCTTCGAATGGACGCTCGCC
ACCGGAATCGCCGTAGTGATTCTGCTGGCGGCCATCGTCATCATGATGGCCATGGTCATGCCGAAATTCAAGGCCATGCA
GGCCCTGACCGACAACATCAACCTCGTGGCCCGCGAGAACCTCACCGGCCTGCGTGTGGTGCGCGCCTACAACGCCGAGG
ACTACCAGGAAGCCAAATTCACCAAGGCCAACAAGGACCTCACCGACACCCAGCTGTTCACCAACCGCGTCATGGCGTTC
ATGATGCCGCTGATGAACACCATCATGAACGGTCTGATGCTTGCCGTCTACTGGATCGGTACCTACCTGATCGATGCCGC
CGGGCTCAAGGACAAGCTCACCGTGTTCTCCAACATGGTGGTGTTCTCCAACTACTCCGTGCAGGTCATCATGAGCTTCC
TGCTCATGAGCATGGTGTTCGTGCTCTGGCCGCGCGCCGACGTGTCCGCGCAGCGCATCATGGAGGTACTCGACACCGAG
CCGATCGTCGAGAACGGCACCAAAACCGCCGCCGACGTGGCCAAAACCGGTCAGCGAGGCACCGTGGAATTCCGCAACGT
CAGCTTCACCTACCCGGATTCGCGCGAGGCGATGCTGGAAGGCATCAACTTCACCGCCGAGCAGGGCCAGACGGTGGCGT
TCATCGGCTCCACCGGCTCCGGCAAGTCGTCTCTTATCAATCTCGTGCCGCGCTTCTATGACACCAGCCAAGGCCAGGTG
TTGGTCGACGGCGTGGACGTGCGCGACTACGACCTGAAGGCCCTGCGCGACAAGATCGGCTACGTGCCGCAGCAGTCCGT
GCTGTTCAAGGGCACCGTGGCCTCCAACGTGAGCTACGGCGATCAGCCGGGCGACCCGGCGGAGGTCGAGATGGCCGATA
CCTCCACCCCGGCCGGGCGCAAGCGCGAGGCCGCGTTGATCGCCGCTGGCAAGGCTGCGGAAGGTGCCGATATACCGGCC
GAGCAGCTGAATCGCGTCAGGGCCGCCGCCGACGTGGCGCAGGCCAGCGAGTTCGTGGCGCGCATGGACGGCGGGTATTC
CGCCGCGATCGCCCAAGGCGGATCGAACGTGTCCGGCGGCCAGAAGCAGCGCCTGTCGATTGCGCGCGCGGTGTACCGTC
ACCCGGAAATCCTGATTTTCGACGACTCGTTCTCCGCGCTCGACTTCAAGACCGACCGCGAAGTGCGCGACGCGCTCGCC
CGCGAGGCCAAGGATTCCACCAAGCTCATCGTGGCCCAGCGCATCGGCACCATCATGAACGCCGACCGCATCGTCGTGCT
CGACGACGGCAAGGTCGTGGGTCAGGGCACGCACAAGGAACTGCTCGACAACTGCGACGTATACCGCCAGATCGCCGAAT
CCCAGCTCAGCCAGTCGGAGCTTACGGCGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrP | Streptococcus mutans UA159 |
48.183 |
100 |
0.49 |