Detailed information NTG0491222

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: KHA81_RS13090
• Genome accession: NZ_CP074391
• Coordinates: 2683949..2685217 (+)
• Length: 422 a.a.
• NCBI ID: WP_015387902.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain L-17
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2678949..2690217

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KHA81_RS13070	-	2680320..2680940 (-)	621	WP_088005508.1	tetratricopeptide repeat protein	-
KHA81_RS13075	mnmA	2681028..2682143 (-)	1116	WP_015387903.1	tRNA 2-thiouridine(34) synthase MnmA	-
KHA81_RS13080	-	2682180..2683319 (-)	1140	WP_003152731.1	cysteine desulfurase family protein	-
KHA81_RS13085	cymR	2683338..2683754 (-)	417	WP_003152730.1	cysteine metabolism transcriptional regulator CymR	-
KHA81_RS13090	rarA	2683949..2685217 (+)	1269	WP_015387902.1	replication-associated recombination protein A	Machinery gene
KHA81_RS13095	-	2685293..2686057 (-)	765	WP_003152728.1	tRNA threonylcarbamoyladenosine dehydratase	-
KHA81_RS13105	aspS	2686384..2688162 (-)	1779	WP_015387901.1	aspartate--tRNA ligase	-
KHA81_RS13110	hisS	2688177..2689451 (-)	1275	WP_003152726.1	histidine--tRNA ligase	-
KHA81_RS13115	-	2689808..2689978 (-)	171	WP_003152722.1	YrzK family protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46701.58 Da
• Isoelectric Point: 7.9153

>NTDB_id=491222 KHA81_RS13090 WP_015387902.1 2683949..2685217(+) (rarA) [Bacillus amyloliquefaciens strain L-17]
MKPLAYRMRPANIEDIIGQEHLVKEDKIIGRMVRAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRELNAVIHNKKDME
IVVQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIRQALKR
ALTDEHRGLGSYSVSVDDDAMDHFAQGCGGDVRSALNALELAVLSTKESSDGTIRIIRETAEECLQKKSYTHDKNGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESISRRLLVIAYEDIGLASPQAGPRVLSAIQTAERIGFPEARIPLANAV
IELCLSPKSNSAISAVDEALKDIRTGKIGDVPKHLKDAHYKGAQELGRGIGYQYPHDFENGWVEQQYLPDPLKNKQYYKP
KQTGKFEAAIKQVYEKLMKQKK

Nucleotide

• Length: 1269 bp

>NTDB_id=491222 KHA81_RS13090 WP_015387902.1 2683949..2685217(+) (rarA) [Bacillus amyloliquefaciens strain L-17]
ATGAAACCATTGGCGTATCGGATGCGGCCTGCCAATATCGAAGACATTATCGGTCAGGAACATTTGGTCAAAGAAGATAA
AATCATCGGCAGAATGGTGCGTGCGAAGCACTTATCATCCATGATCCTGTACGGACCGCCGGGCATCGGAAAAACGTCCA
TCGCCACAGCGATCGCAGGATCGACAAGCATCGCATTCAGGGAATTGAATGCCGTCATTCATAATAAAAAAGACATGGAG
ATTGTCGTACAGGAAGCGAAAATGTCAGGCCAGGTCATTTTAATCCTTGATGAAGTGCACAGACTTGATAAGGGAAAGCA
GGATTTTCTGCTGCCCTATTTAGAAAACGGCATGATTATTTTAATCGGCGCGACGACCGCCAATCCTTATCATGCCATTA
ACCCGGCCATCAGAAGCCGGACCCAGATATTTGAGCTTGAACCGTTAACACCCGATCTGATCAGGCAGGCATTGAAAAGA
GCGCTCACAGATGAACACCGGGGACTCGGTTCCTACAGCGTTTCGGTGGACGACGACGCGATGGATCATTTCGCACAAGG
GTGCGGAGGAGACGTCCGCTCCGCTTTGAACGCACTGGAGCTTGCCGTGCTCTCCACAAAGGAATCAAGCGACGGCACGA
TCCGAATTATACGGGAAACGGCGGAAGAATGTCTGCAGAAAAAAAGCTATACCCATGATAAAAACGGCGATGCGCATTAT
GACGTCTTATCCGCGTTCCAAAAATCGATCCGGGGCTCGGACGCAAACGCCGCCCTTCATTATCTGGCCCGTCTGATCGA
AGCCGGAGACCTTGAAAGCATATCAAGAAGGCTTCTCGTGATCGCCTATGAAGATATCGGCCTCGCAAGCCCGCAGGCAG
GCCCCCGGGTGCTGAGCGCGATTCAGACCGCAGAACGGATCGGCTTTCCGGAAGCAAGAATTCCGCTGGCCAATGCGGTA
ATCGAATTATGCCTCTCGCCGAAATCAAACTCCGCCATTTCAGCCGTTGATGAGGCGCTCAAAGACATCAGGACGGGTAA
AATCGGCGATGTGCCGAAACATTTAAAAGACGCCCACTATAAAGGGGCCCAAGAGCTCGGACGCGGGATCGGCTATCAAT
ATCCCCACGATTTCGAGAACGGATGGGTCGAACAGCAATATTTGCCCGATCCGTTAAAAAACAAGCAATACTATAAACCG
AAACAAACGGGGAAATTTGAAGCCGCCATAAAGCAAGTGTATGAAAAACTGATGAAGCAGAAAAAATAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	90.261	99.763	0.9