Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | ILQ33_RS02695 | Genome accession | NZ_CP062769 |
| Coordinates | 556873..557997 (+) | Length | 374 a.a. |
| NCBI ID | WP_000228544.1 | Uniprot ID | A0A9P2PX49 |
| Organism | Escherichia coli O157:H7 strain Z852 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 530987..557997 | 556873..557997 | within | 0 |
Gene organization within MGE regions
Location: 530987..557997
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ILQ33_RS02480 (ILQ33_02480) | rpsL | 530987..531361 (+) | 375 | WP_000246815.1 | 30S ribosomal protein S12 | - |
| ILQ33_RS02485 (ILQ33_02485) | rpsG | 531458..531928 (+) | 471 | WP_001138043.1 | 30S ribosomal protein S7 | - |
| ILQ33_RS02490 (ILQ33_02490) | fusA | 532025..534139 (+) | 2115 | WP_000124700.1 | elongation factor G | - |
| ILQ33_RS02495 (ILQ33_02495) | tuf | 534210..535394 (+) | 1185 | WP_000031783.1 | elongation factor Tu | - |
| ILQ33_RS02500 (ILQ33_02500) | bfd | 535577..535771 (+) | 195 | WP_000289090.1 | bacterioferritin-associated ferredoxin | - |
| ILQ33_RS02505 (ILQ33_02505) | bfr | 535844..536320 (+) | 477 | WP_000675516.1 | bacterioferritin | - |
| ILQ33_RS02510 (ILQ33_02510) | - | 536317..536784 (-) | 468 | WP_000381746.1 | A24 family peptidase | - |
| ILQ33_RS02515 (ILQ33_02515) | rpsJ | 537163..537474 (+) | 312 | WP_001181004.1 | 30S ribosomal protein S10 | - |
| ILQ33_RS02520 (ILQ33_02520) | rplC | 537507..538136 (+) | 630 | WP_000579833.1 | 50S ribosomal protein L3 | - |
| ILQ33_RS02525 (ILQ33_02525) | rplD | 538147..538752 (+) | 606 | WP_000424395.1 | 50S ribosomal protein L4 | - |
| ILQ33_RS02530 (ILQ33_02530) | rplW | 538749..539051 (+) | 303 | WP_000617544.1 | 50S ribosomal protein L23 | - |
| ILQ33_RS02535 (ILQ33_02535) | rplB | 539069..539890 (+) | 822 | WP_000301864.1 | 50S ribosomal protein L2 | - |
| ILQ33_RS02540 (ILQ33_02540) | rpsS | 539907..540185 (+) | 279 | WP_001138117.1 | 30S ribosomal protein S19 | - |
| ILQ33_RS02545 (ILQ33_02545) | rplV | 540200..540532 (+) | 333 | WP_000447529.1 | 50S ribosomal protein L22 | - |
| ILQ33_RS02550 (ILQ33_02550) | rpsC | 540550..541251 (+) | 702 | WP_000529945.1 | 30S ribosomal protein S3 | - |
| ILQ33_RS02555 (ILQ33_02555) | rplP | 541264..541674 (+) | 411 | WP_000941212.1 | 50S ribosomal protein L16 | - |
| ILQ33_RS02560 (ILQ33_02560) | rpmC | 541674..541865 (+) | 192 | WP_000644741.1 | 50S ribosomal protein L29 | - |
| ILQ33_RS02565 (ILQ33_02565) | rpsQ | 541865..542119 (+) | 255 | WP_000130100.1 | 30S ribosomal protein S17 | - |
| ILQ33_RS02570 (ILQ33_02570) | rplN | 542284..542655 (+) | 372 | WP_000613955.1 | 50S ribosomal protein L14 | - |
| ILQ33_RS02575 (ILQ33_02575) | rplX | 542666..542980 (+) | 315 | WP_000729185.1 | 50S ribosomal protein L24 | - |
| ILQ33_RS02580 (ILQ33_02580) | rplE | 542995..543534 (+) | 540 | WP_001096200.1 | 50S ribosomal protein L5 | - |
| ILQ33_RS02585 (ILQ33_02585) | rpsN | 543549..543854 (+) | 306 | WP_001118930.1 | 30S ribosomal protein S14 | - |
| ILQ33_RS02590 (ILQ33_02590) | rpsH | 543888..544280 (+) | 393 | WP_000062611.1 | 30S ribosomal protein S8 | - |
| ILQ33_RS02595 (ILQ33_02595) | rplF | 544293..544826 (+) | 534 | WP_000091945.1 | 50S ribosomal protein L6 | - |
| ILQ33_RS02600 (ILQ33_02600) | rplR | 544836..545189 (+) | 354 | WP_000358960.1 | 50S ribosomal protein L18 | - |
| ILQ33_RS02605 (ILQ33_02605) | rpsE | 545204..545707 (+) | 504 | WP_000940121.1 | 30S ribosomal protein S5 | - |
| ILQ33_RS02610 (ILQ33_02610) | rpmD | 545711..545890 (+) | 180 | WP_001140433.1 | 50S ribosomal protein L30 | - |
| ILQ33_RS02615 (ILQ33_02615) | rplO | 545894..546328 (+) | 435 | WP_001238917.1 | 50S ribosomal protein L15 | - |
| ILQ33_RS02620 (ILQ33_02620) | secY | 546336..547667 (+) | 1332 | WP_001118861.1 | preprotein translocase subunit SecY | - |
| ILQ33_RS02625 (ILQ33_02625) | rpmJ | 547699..547815 (+) | 117 | WP_000868187.1 | 50S ribosomal protein L36 | - |
| ILQ33_RS02630 (ILQ33_02630) | rpsM | 547962..548318 (+) | 357 | WP_000090775.1 | 30S ribosomal protein S13 | - |
| ILQ33_RS02635 (ILQ33_02635) | rpsK | 548335..548724 (+) | 390 | WP_001029684.1 | 30S ribosomal protein S11 | - |
| ILQ33_RS02640 (ILQ33_02640) | rpsD | 548758..549378 (+) | 621 | WP_000135224.1 | 30S ribosomal protein S4 | - |
| ILQ33_RS02645 (ILQ33_02645) | rpoA | 549404..550393 (+) | 990 | WP_001162094.1 | DNA-directed RNA polymerase subunit alpha | - |
| ILQ33_RS02650 (ILQ33_02650) | rplQ | 550434..550817 (+) | 384 | WP_001216368.1 | 50S ribosomal protein L17 | - |
| ILQ33_RS02655 (ILQ33_02655) | yhdN | 550924..551292 (+) | 369 | WP_000266488.1 | DUF1992 domain-containing protein | - |
| ILQ33_RS02660 (ILQ33_02660) | zntR | 551303..551728 (+) | 426 | WP_000285607.1 | Zn(2+)-responsive transcriptional regulator | - |
| ILQ33_RS02665 (ILQ33_02665) | arfA | 551784..552002 (+) | 219 | WP_000092696.1 | alternative ribosome-rescue factor ArfA | - |
| ILQ33_RS02670 (ILQ33_02670) | mscL | 551999..552409 (-) | 411 | WP_000022442.1 | large-conductance mechanosensitive channel protein MscL | - |
| ILQ33_RS02675 (ILQ33_02675) | trkA | 552539..553915 (-) | 1377 | WP_000691382.1 | Trk system potassium transporter TrkA | - |
| ILQ33_RS02680 (ILQ33_02680) | rsmB | 553937..555226 (-) | 1290 | WP_001301795.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| ILQ33_RS02685 (ILQ33_02685) | fmt | 555272..556219 (-) | 948 | WP_000004459.1 | methionyl-tRNA formyltransferase | - |
| ILQ33_RS02690 (ILQ33_02690) | def | 556234..556743 (-) | 510 | WP_000114984.1 | peptide deformylase | - |
| ILQ33_RS02695 (ILQ33_02695) | dprA | 556873..557997 (+) | 1125 | WP_000228544.1 | DNA-protecting protein DprA | Machinery gene |
Sequence
Protein
Download Length: 374 a.a. Molecular weight: 41005.96 Da Isoelectric Point: 6.2655
>NTDB_id=491222 ILQ33_RS02695 WP_000228544.1 556873..557997(+) (dprA) [Escherichia coli O157:H7 strain Z852]
MVDTEIWLRLMSISSLYGDDMVRIAHWLARQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSE
FYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLAKHGVTITSGLARGIDGVAHKAALQVN
GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA
LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQEDVALPFPELLANVGDE
VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRRTNVFV
MVDTEIWLRLMSISSLYGDDMVRIAHWLARQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSE
FYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLAKHGVTITSGLARGIDGVAHKAALQVN
GVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA
LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQEDVALPFPELLANVGDE
VTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRRTNVFV
Nucleotide
Download Length: 1125 bp
>NTDB_id=491222 ILQ33_RS02695 WP_000228544.1 556873..557997(+) (dprA) [Escherichia coli O157:H7 strain Z852]
ATGGTCGATACAGAAATTTGGCTGCGTTTAATGAGTATCAGCAGCTTGTACGGCGATGATATGGTCCGTATAGCTCACTG
GCTGGCAAGACAGTCGCATATTGATGCGGTTGTATTGCAGCAAACAGGGCTTACATTGCGGCAGGCACAACGCTTTCTTT
CATTTCCGCGGAAGAGTATCGAAAGCTCACTTTGTTGGTTGGAGCAACCCAACCATCATTTAATCCCTGCGGACAGCGAA
TTTTATCCTCCTCAACTTCTGGCGACGACAGATTACCCCGGTGCACTGTTTGTTGAAGGAGAACTGCACGCGCTGCATTC
ATTTCAGCTTGCCGTAGTGGGGAGTCGGGCGCATTCATGGTATGGCGAGCGATGGGGACGATTATTTTGCGAAACTCTGG
CGAAGCATGGAGTGACAATTACGAGTGGACTGGCGCGTGGAATCGATGGTGTAGCGCATAAAGCAGCCTTACAGGTAAAT
GGCGTCAGCATTGCTGTATTGGGGAATGGACTTAATACCATTCATCCCCGCCGTCATGCCCGACTGGCTGCCAGTCTGCT
TGAACAGGGGGGCGCTCTCGTCTCGGAATTTCCCCTCGATGTTCCACCCCTTGCTTACAATTTCCCACGAAGAAATCGCA
TTATCAGTGGTCTAAGTAAAGGTGTACTGGTGGTGGAAGCGGCTTTGCGTAGTGGTTCGCTGGTGACAGCACGTTGTGCG
CTTGAGCAGGGGCGAGAAGTTTTTGCCTTGCCAGGTCCAATAGGGAATCCGGGAAGCGAAGGGCCTCACTGGTTAATAAA
ACAAGGTGCGATTCTTGTGACGGAACCGGAAGAAATTCTGGAAAACTTGCAATTTGGATTGCACTGGTTGCCAGACGCCC
CTGAAAATTCATTTTATTCACCAGATCAGGAAGACGTGGCATTGCCATTTCCTGAGCTCCTGGCTAACGTAGGAGATGAG
GTAACACCTGTTGACGTCGTCGCTGAACGTGCCGGCCAACCTGTGCCAGAGGTAGTTACTCAACTACTCGAACTGGAGTT
AGCAGGATGGATCGCAGCTGTACCCGGCGGCTATGTCCGATTGAGGAGGGCATGCCATGTTCGACGTACTAATGTATTTG
TTTGA
ATGGTCGATACAGAAATTTGGCTGCGTTTAATGAGTATCAGCAGCTTGTACGGCGATGATATGGTCCGTATAGCTCACTG
GCTGGCAAGACAGTCGCATATTGATGCGGTTGTATTGCAGCAAACAGGGCTTACATTGCGGCAGGCACAACGCTTTCTTT
CATTTCCGCGGAAGAGTATCGAAAGCTCACTTTGTTGGTTGGAGCAACCCAACCATCATTTAATCCCTGCGGACAGCGAA
TTTTATCCTCCTCAACTTCTGGCGACGACAGATTACCCCGGTGCACTGTTTGTTGAAGGAGAACTGCACGCGCTGCATTC
ATTTCAGCTTGCCGTAGTGGGGAGTCGGGCGCATTCATGGTATGGCGAGCGATGGGGACGATTATTTTGCGAAACTCTGG
CGAAGCATGGAGTGACAATTACGAGTGGACTGGCGCGTGGAATCGATGGTGTAGCGCATAAAGCAGCCTTACAGGTAAAT
GGCGTCAGCATTGCTGTATTGGGGAATGGACTTAATACCATTCATCCCCGCCGTCATGCCCGACTGGCTGCCAGTCTGCT
TGAACAGGGGGGCGCTCTCGTCTCGGAATTTCCCCTCGATGTTCCACCCCTTGCTTACAATTTCCCACGAAGAAATCGCA
TTATCAGTGGTCTAAGTAAAGGTGTACTGGTGGTGGAAGCGGCTTTGCGTAGTGGTTCGCTGGTGACAGCACGTTGTGCG
CTTGAGCAGGGGCGAGAAGTTTTTGCCTTGCCAGGTCCAATAGGGAATCCGGGAAGCGAAGGGCCTCACTGGTTAATAAA
ACAAGGTGCGATTCTTGTGACGGAACCGGAAGAAATTCTGGAAAACTTGCAATTTGGATTGCACTGGTTGCCAGACGCCC
CTGAAAATTCATTTTATTCACCAGATCAGGAAGACGTGGCATTGCCATTTCCTGAGCTCCTGGCTAACGTAGGAGATGAG
GTAACACCTGTTGACGTCGTCGCTGAACGTGCCGGCCAACCTGTGCCAGAGGTAGTTACTCAACTACTCGAACTGGAGTT
AGCAGGATGGATCGCAGCTGTACCCGGCGGCTATGTCCGATTGAGGAGGGCATGCCATGTTCGACGTACTAATGTATTTG
TTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Vibrio campbellii strain DS40M4 |
48.78 |
98.663 |
0.481 |
| dprA | Glaesserella parasuis strain SC1401 |
45.401 |
90.107 |
0.409 |
| dprA | Vibrio cholerae strain A1552 |
49.355 |
82.888 |
0.409 |
| dprA | Haemophilus influenzae Rd KW20 |
44.214 |
90.107 |
0.398 |
| dprA | Legionella pneumophila strain ERS1305867 |
44.545 |
88.235 |
0.393 |