Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | IF704_RS02795 | Genome accession | NZ_CP062380 |
| Coordinates | 505208..506278 (+) | Length | 356 a.a. |
| NCBI ID | WP_000776413.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain NAS_AN_076 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 500208..511278
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IF704_RS02765 (IF704_02740) | - | 500631..502094 (+) | 1464 | WP_001017867.1 | rhomboid family intramembrane serine protease | - |
| IF704_RS02770 (IF704_02745) | - | 502075..502278 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| IF704_RS02775 (IF704_02750) | - | 502275..503261 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| IF704_RS02780 (IF704_02755) | - | 503261..503590 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| IF704_RS02785 (IF704_02760) | - | 503587..504210 (+) | 624 | WP_047213494.1 | MBL fold metallo-hydrolase | - |
| IF704_RS02790 (IF704_02765) | comGA | 504262..505236 (+) | 975 | WP_000697222.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| IF704_RS02795 (IF704_02770) | comGB | 505208..506278 (+) | 1071 | WP_000776413.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| IF704_RS02800 (IF704_02775) | comGC | 506292..506603 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| IF704_RS02805 (IF704_02780) | comGD | 506581..507027 (+) | 447 | WP_072357807.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| IF704_RS02810 (IF704_02785) | comGE | 507014..507313 (+) | 300 | WP_000844415.1 | hypothetical protein | Machinery gene |
| IF704_RS02815 (IF704_02790) | comGF | 507231..507728 (+) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| IF704_RS02820 (IF704_02795) | - | 507825..507971 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| IF704_RS02825 (IF704_02800) | - | 507961..508485 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| IF704_RS02830 (IF704_02805) | gcvT | 508644..509735 (+) | 1092 | WP_000093354.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| IF704_RS02835 (IF704_02810) | gcvPA | 509755..511101 (+) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 41475.94 Da Isoelectric Point: 10.1030
>NTDB_id=488819 IF704_RS02795 WP_000776413.1 505208..506278(+) (comGB) [Staphylococcus aureus strain NAS_AN_076]
MKLQWINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGTTILSEISNGAPCNQILSLIG
YSDTIVMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILISIFIAMIIILNLTVIPQFQQLYTSMNIQLS
SFQKTLSFFITSLPTIIVVMLIIVSMLAIIMKLIYNKLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIK
QTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
MKLQWINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGTTILSEISNGAPCNQILSLIG
YSDTIVMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILISIFIAMIIILNLTVIPQFQQLYTSMNIQLS
SFQKTLSFFITSLPTIIVVMLIIVSMLAIIMKLIYNKLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIK
QTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
Nucleotide
Download Length: 1071 bp
>NTDB_id=488819 IF704_RS02795 WP_000776413.1 505208..506278(+) (comGB) [Staphylococcus aureus strain NAS_AN_076]
GTGAAACTACAATGGATAAATACATTTAAACTACATTCTAAGAAGCGACAATTAAGTAAGGCCCAACAAATCGATTTACT
TTCAAATTTATGTAATTTGTTGAAATATGGTTTCACTCTGTATCAAAGTTTTCAATTTTTAAATCTTCAAATGACATATA
AAAATAAGCAATTAGGTACCACCATTCTAAGTGAAATTTCAAATGGTGCACCATGCAATCAGATATTATCACTGATAGGT
TATAGCGATACTATCGTCATGCAAGTATATTTGGCAGAAAGATTTGGCAATATTATAGACGTTCTAGAAGAAACCGTAAA
TTATATGAAAGTGAATAGAAAGTCAGAACAACGATTGTTAAAGACACTGCAATACCCCTTAATACTAATTTCTATTTTTA
TTGCTATGATTATTATATTAAACCTCACAGTAATCCCACAGTTTCAACAATTATATACTTCTATGAATATTCAACTATCT
TCTTTTCAAAAAACATTGTCTTTTTTCATTACCAGCTTACCTACTATAATTGTAGTAATGCTCATAATAGTATCTATGTT
GGCTATTATTATGAAGTTAATTTACAACAAATTGAATATGCTCAATAAGATAAACTTTGTGATGAAACTACCGCTAATAT
CAGGCTATTTCCAATTATTTAAAACTTATTTTGTAACTAATGAATTAGTGTTGTTTTATAAAAATGGTATTACACTTCAA
TCAATAGTAGACGTTTATATTAACCATAGTAGTGATCCATTTAGACAGTTTCTAGGTAAATACTTATTAACTTATTCAGA
AATGGGATATGGTTTGCCTCAAATTTTAGAAAAATTAAAATGCTTTAAGCCTCAATTAATTAAGTTTGTGCTACAAGGTG
AAAAGAGAGGGAAGCTAGAAGTAGAACTAAAGTTATATTCGCAAATATTAGTAAAACAAATAGAAGATAAAGCGATAAAA
CAGACTCAGTTTTTACAGCCTATTTTATTTTTGATTTTAGGTTTATTTATTGTCGCAATTTATTTAGTAATTATGTTACC
AATGTTTCAAATGATGCAAAGTATAAAATAA
GTGAAACTACAATGGATAAATACATTTAAACTACATTCTAAGAAGCGACAATTAAGTAAGGCCCAACAAATCGATTTACT
TTCAAATTTATGTAATTTGTTGAAATATGGTTTCACTCTGTATCAAAGTTTTCAATTTTTAAATCTTCAAATGACATATA
AAAATAAGCAATTAGGTACCACCATTCTAAGTGAAATTTCAAATGGTGCACCATGCAATCAGATATTATCACTGATAGGT
TATAGCGATACTATCGTCATGCAAGTATATTTGGCAGAAAGATTTGGCAATATTATAGACGTTCTAGAAGAAACCGTAAA
TTATATGAAAGTGAATAGAAAGTCAGAACAACGATTGTTAAAGACACTGCAATACCCCTTAATACTAATTTCTATTTTTA
TTGCTATGATTATTATATTAAACCTCACAGTAATCCCACAGTTTCAACAATTATATACTTCTATGAATATTCAACTATCT
TCTTTTCAAAAAACATTGTCTTTTTTCATTACCAGCTTACCTACTATAATTGTAGTAATGCTCATAATAGTATCTATGTT
GGCTATTATTATGAAGTTAATTTACAACAAATTGAATATGCTCAATAAGATAAACTTTGTGATGAAACTACCGCTAATAT
CAGGCTATTTCCAATTATTTAAAACTTATTTTGTAACTAATGAATTAGTGTTGTTTTATAAAAATGGTATTACACTTCAA
TCAATAGTAGACGTTTATATTAACCATAGTAGTGATCCATTTAGACAGTTTCTAGGTAAATACTTATTAACTTATTCAGA
AATGGGATATGGTTTGCCTCAAATTTTAGAAAAATTAAAATGCTTTAAGCCTCAATTAATTAAGTTTGTGCTACAAGGTG
AAAAGAGAGGGAAGCTAGAAGTAGAACTAAAGTTATATTCGCAAATATTAGTAAAACAAATAGAAGATAAAGCGATAAAA
CAGACTCAGTTTTTACAGCCTATTTTATTTTTGATTTTAGGTTTATTTATTGTCGCAATTTATTTAGTAATTATGTTACC
AATGTTTCAAATGATGCAAAGTATAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Staphylococcus aureus MW2 |
99.438 |
100 |
0.994 |
| comGB | Staphylococcus aureus N315 |
99.438 |
100 |
0.994 |