Detailed information NTG0487656

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: KEF49_RS12635
• Genome accession: NZ_CP073635
• Coordinates: 2509791..2511059 (+)
• Length: 422 a.a.
• NCBI ID: WP_065981963.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain Ba13
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2504791..2516059

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KEF49_RS12615 (KEF49_12615)	-	2506162..2506812 (-)	651	WP_013353019.1	tetratricopeptide repeat protein	-
KEF49_RS12620 (KEF49_12620)	mnmA	2506870..2507985 (-)	1116	WP_065981961.1	tRNA 2-thiouridine(34) synthase MnmA	-
KEF49_RS12625 (KEF49_12625)	-	2508022..2509161 (-)	1140	WP_065981962.1	cysteine desulfurase family protein	-
KEF49_RS12630 (KEF49_12630)	cymR	2509180..2509596 (-)	417	WP_013353022.1	cysteine metabolism transcriptional regulator CymR	-
KEF49_RS12635 (KEF49_12635)	rarA	2509791..2511059 (+)	1269	WP_065981963.1	replication-associated recombination protein A	Machinery gene
KEF49_RS12640 (KEF49_12640)	-	2511175..2511939 (-)	765	WP_115997691.1	tRNA threonylcarbamoyladenosine dehydratase	-
KEF49_RS12650 (KEF49_12650)	aspS	2512264..2514042 (-)	1779	WP_065981964.1	aspartate--tRNA ligase	-
KEF49_RS12655 (KEF49_12655)	hisS	2514057..2515331 (-)	1275	WP_065981965.1	histidine--tRNA ligase	-
KEF49_RS12660 (KEF49_12660)	-	2515711..2515881 (-)	171	WP_161957662.1	YrzK family protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46645.52 Da
• Isoelectric Point: 8.2451

>NTDB_id=487656 KEF49_RS12635 WP_065981963.1 2509791..2511059(+) (rarA) [Bacillus amyloliquefaciens strain Ba13]
MKPLAYRMRPANIEDIIGQEHLVKEDKIIGRMVRAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVIHNKKDME
IVVQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALRR
ALTDEHRGLGSYSVSVDDDAMDHFAQGCGGDVRSALNALELAVLSTKESSDGTIRITRETAEECLQKKSYTHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESISRRLLVIAYEDIGLASPQAGPRVLGAIQTAERIGFPEARIPLANAV
IELCLSPKSNSAISAVDEALKDIRSGKIGDVPKHLKDAHYKGAQELGRGIGYQYPHDFENGWVEQQYLPDPLKNKQYYKP
KQTGKFEAAIKQVYEKLMKQKK

Nucleotide

• Length: 1269 bp

>NTDB_id=487656 KEF49_RS12635 WP_065981963.1 2509791..2511059(+) (rarA) [Bacillus amyloliquefaciens strain Ba13]
ATGAAACCATTGGCGTATCGGATGCGGCCTGCCAATATCGAAGACATTATCGGCCAGGAACATTTGGTCAAAGAAGATAA
AATCATCGGCAGAATGGTGCGCGCAAAGCACCTATCATCCATGATCCTGTACGGACCGCCGGGCATCGGAAAAACGTCCA
TCGCCACAGCGATCGCAGGATCGACAAGCATCGCATTCAGAAAATTGAATGCCGTCATTCATAATAAAAAAGACATGGAA
ATTGTCGTACAGGAAGCGAAAATGTCAGGCCAGGTCATCTTAATACTTGATGAAGTGCACAGGCTTGATAAGGGGAAGCA
GGATTTTCTGCTGCCCTATTTAGAAAACGGCATGATTATTTTAATCGGCGCGACCACCGCCAATCCTTATCATGCCATTA
ACCCGGCCATCAGAAGCCGTACCCAGATATTCGAACTCGAACCGTTAACACCGGATCTGATCAAGCAGGCATTGAGAAGA
GCGCTCACAGATGAACACCGGGGACTCGGTTCCTACAGTGTTTCGGTGGACGACGACGCGATGGATCATTTCGCGCAAGG
GTGCGGAGGGGACGTCCGCTCCGCTTTGAATGCACTGGAGCTTGCCGTGCTTTCCACAAAGGAATCAAGTGACGGCACGA
TCCGCATTACGCGGGAAACAGCGGAAGAATGTCTGCAGAAAAAAAGCTATACCCATGATAAAGACGGAGATGCGCATTAT
GACGTCTTATCGGCATTCCAAAAATCAATCCGCGGCTCAGACGCAAACGCCGCACTGCATTATTTGGCCCGACTGATCGA
AGCCGGCGATCTTGAAAGCATTTCCAGAAGGCTTCTCGTGATCGCCTATGAAGATATCGGCCTTGCAAGCCCGCAGGCAG
GCCCCCGGGTGCTGGGCGCGATTCAGACCGCAGAGCGGATCGGCTTTCCCGAGGCGAGAATTCCGCTGGCGAATGCGGTA
ATCGAATTATGCCTCTCGCCAAAATCAAACTCCGCCATCTCAGCCGTTGATGAAGCGCTCAAAGATATCAGATCGGGTAA
AATCGGCGATGTGCCGAAACATTTAAAAGACGCTCACTATAAAGGAGCCCAAGAGCTCGGTCGCGGAATCGGCTATCAAT
ATCCTCACGATTTCGAGAACGGATGGGTCGAACAGCAATATTTGCCTGATCCGTTAAAAAACAAACAATACTATAAACCG
AAACAAACGGGGAAATTTGAAGCCGCCATAAAACAAGTGTATGAAAAACTGATGAAACAGAAGAAATAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	91.211	99.763	0.91