Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IG194_RS10930 Genome accession   NZ_CP062122
Coordinates   2391959..2392366 (-) Length   135 a.a.
NCBI ID   WP_009615249.1    Uniprot ID   A0A024H9X0
Organism   Pseudomonas sp. ADPe     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2386959..2397366
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IG194_RS10910 (IG194_10910) - 2387918..2388775 (-) 858 WP_009615260.1 protein-glutamate O-methyltransferase -
  IG194_RS10915 (IG194_10915) - 2388835..2390883 (-) 2049 WP_043269485.1 methyl-accepting chemotaxis protein -
  IG194_RS10920 (IG194_10920) - 2390967..2391503 (-) 537 WP_009615258.1 chemotaxis protein CheW -
  IG194_RS10925 (IG194_10925) pilH 2391549..2391914 (-) 366 WP_009615257.1 twitching motility response regulator PilH -
  IG194_RS10930 (IG194_10930) pilG 2391959..2392366 (-) 408 WP_009615249.1 twitching motility response regulator PilG Regulator
  IG194_RS10935 (IG194_10935) gshB 2392614..2393585 (+) 972 WP_043317848.1 glutathione synthase -
  IG194_RS10940 (IG194_10940) - 2393670..2394563 (+) 894 WP_009615247.1 energy transducer TonB -
  IG194_RS10945 (IG194_10945) - 2394613..2395179 (+) 567 WP_009615246.1 YqgE/AlgH family protein -
  IG194_RS10950 (IG194_10950) ruvX 2395179..2395607 (+) 429 WP_009615245.1 Holliday junction resolvase RuvX -
  IG194_RS10955 (IG194_10955) pyrR 2395728..2396237 (+) 510 WP_009615244.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  IG194_RS10960 (IG194_10960) - 2396277..2397281 (+) 1005 WP_043269491.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14828.19 Da        Isoelectric Point: 6.7119

>NTDB_id=486157 IG194_RS10930 WP_009615249.1 2391959..2392366(-) (pilG) [Pseudomonas sp. ADPe]
MEQHSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKTHVPDFTPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=486157 IG194_RS10930 WP_009615249.1 2391959..2392366(-) (pilG) [Pseudomonas sp. ADPe]
ATGGAACAGCATTCCGATGGTTTGAAGGTGATGGTCATCGACGATTCCAAGACGATCCGTCGTACCGCCGAAACCCTGCT
CAAGAAAGTCGGCTGCGATGTCATCACGGCCATCGATGGCTTCGACGCGCTGGCGAAGATCGCCGACACCCATCCGAACA
TCATCTTCGTCGACATCATGATGCCTCGGCTCGACGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCCTTCAAA
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGTCGTATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCCTTCAGCAAGGAAGAGCTGCTCGGCGCCATCAAGACCCACGTGCCCGACTTCACCCCGGTGGAGCAAG
CTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A024H9X0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

92.593

0.696
  vicR Streptococcus mutans UA159

42.063

93.333

0.393