Detailed information NTG0485817

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: KBP48_RS06945
• Genome accession: NZ_CP072932
• Coordinates: 1528845..1530212 (-)
• Length: 455 a.a.
• NCBI ID: WP_027699990.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. multiplex strain BB08-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1523845..1535212

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KBP48_RS06925 (KBP48_06925)	-	1524723..1525460 (+)	738	WP_004083738.1	pteridine reductase	-
KBP48_RS06930 (KBP48_06930)	folK	1525471..1525986 (-)	516	WP_038229884.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	-
KBP48_RS06935 (KBP48_06935)	-	1526111..1527607 (-)	1497	WP_071869771.1	ATP-binding protein	-
KBP48_RS06940 (KBP48_06940)	crcB	1528283..1528684 (-)	402	WP_004083741.1	fluoride efflux transporter CrcB	-
KBP48_RS06945 (KBP48_06945)	rarA	1528845..1530212 (-)	1368	WP_027699990.1	replication-associated recombination protein A	Machinery gene
KBP48_RS06950 (KBP48_06950)	lolA	1530337..1530963 (-)	627	WP_051247953.1	outer membrane lipoprotein chaperone LolA	-
KBP48_RS06955 (KBP48_06955)	-	1531526..1533436 (-)	1911	WP_004083744.1	DUF3857 domain-containing transglutaminase family protein	-

Sequence

Protein

• Length: 455 a.a.
• Molecular weight: 50808.02 Da
• Isoelectric Point: 6.5799

>NTDB_id=485817 KBP48_RS06945 WP_027699990.1 1528845..1530212(-) (rarA) [Xylella fastidiosa subsp. multiplex strain BB08-1]
MTRQRFPTLQHDLLGVAPLLQPLAERMRPRTLHEMVGQKRLLAPDRALHRAVASGNVHSMILWGPPGCGKTTLSLLLAHY
IDAEFRAVSAVLSGLPEVRQILAEAAQRFSEGRRTVLFVDEVHRFNKMQQDAFLPHIERGSIIFVGATTENPSFELNSAL
LSRCRVHVLEAVSSQDIVVALQRALQDTERGLGGQKIEVSEASLLEIAKAADGDVRRALTLLEIAAELAQDEDEQITADL
LSQVLADRSRRFDKRGEQFYDQISALHKSVRSSNPDAALYWLLRMLDGGCDPIYLARRLTRMAIEDIGLADPRAQSMALE
AWDIYERLGSPEGDLAFAQLVLYLASTAKSNAGYVAFNVAKEDIRQTGTQDVPLHLRNAPTRLMKSLGYGIEYQYDHDAE
NGVALEQTCFPDALGERIYYQPVSRGLEIKLKEKLDWLRAARAQIQADKPQRPRA

Nucleotide

• Length: 1368 bp

>NTDB_id=485817 KBP48_RS06945 WP_027699990.1 1528845..1530212(-) (rarA) [Xylella fastidiosa subsp. multiplex strain BB08-1]
GTGACACGACAGCGCTTTCCGACTCTTCAGCATGATTTGCTTGGTGTGGCTCCTCTCTTGCAGCCACTGGCCGAGCGCAT
GCGTCCTCGTACTCTTCATGAGATGGTAGGACAGAAGCGCTTGCTTGCCCCAGATCGTGCATTGCATCGTGCGGTGGCTT
CCGGGAATGTGCATTCCATGATTTTGTGGGGACCGCCAGGGTGCGGCAAGACGACATTGTCATTGCTGTTAGCGCATTAC
ATTGATGCAGAATTTCGGGCAGTCTCGGCTGTTCTTTCGGGGTTGCCGGAGGTGCGTCAGATCTTGGCTGAGGCTGCGCA
GCGTTTTTCTGAAGGACGCCGCACCGTCTTGTTCGTGGACGAAGTGCATCGTTTTAACAAGATGCAGCAGGATGCGTTTC
TGCCGCATATCGAGCGTGGTTCCATTATTTTCGTTGGTGCCACTACTGAGAATCCATCCTTCGAATTGAACTCGGCGTTA
CTGTCGCGTTGCCGTGTCCACGTGTTGGAGGCAGTGTCGTCACAGGATATCGTTGTGGCATTGCAGCGGGCGTTGCAGGA
TACGGAGCGGGGTTTGGGTGGGCAGAAGATTGAAGTGTCTGAAGCCTCTCTGTTGGAGATTGCCAAGGCTGCAGATGGTG
ACGTGCGTCGTGCGCTCACCTTGTTGGAGATTGCTGCTGAGCTTGCCCAGGATGAGGATGAGCAGATAACCGCTGACTTG
CTTTCGCAAGTGCTTGCCGATCGTAGTCGGCGCTTCGACAAACGGGGGGAGCAGTTCTATGACCAGATTTCGGCCTTGCA
CAAGAGTGTACGTAGTTCCAACCCGGATGCGGCATTGTATTGGTTGCTGCGTATGCTGGATGGTGGTTGTGATCCTATCT
ACTTGGCCCGGCGCTTGACCCGCATGGCGATTGAGGATATCGGTTTGGCTGATCCGCGTGCACAGTCGATGGCTCTGGAG
GCTTGGGACATCTATGAGCGGTTGGGTAGCCCGGAGGGAGATCTGGCGTTCGCGCAGTTGGTGCTGTACTTGGCAAGTAC
AGCAAAATCGAATGCTGGCTATGTTGCGTTCAATGTGGCCAAGGAGGACATTCGCCAGACGGGTACTCAGGATGTTCCGC
TACATCTGCGCAATGCACCGACCAGACTCATGAAAAGTCTCGGTTACGGTATCGAGTATCAGTACGATCATGATGCTGAG
AACGGTGTTGCGCTGGAACAGACTTGTTTTCCCGATGCGCTGGGGGAGCGTATTTACTACCAACCGGTATCCCGCGGTCT
GGAGATTAAGCTGAAGGAGAAGTTGGACTGGTTGCGTGCAGCACGTGCTCAGATTCAAGCGGATAAGCCGCAGCGGCCGC
GTGCATAG

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (273-438)

• AAA C-terminal domain (AAA_assoc_2) (194-271)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (27-146)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	38.771	92.967	0.36