Detailed information NTG0485495

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: J9312_RS13815
• Genome accession: NZ_CP072845
• Coordinates: 2552424..2553689 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain XP
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2547424..2558689

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J9312_RS13795 (J9312_13695)	yrrB	2548795..2549415 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
J9312_RS13800 (J9312_13700)	mnmA	2549501..2550616 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
J9312_RS13805 (J9312_13705)	iscSA	2550647..2551786 (-)	1140	WP_014480425.1	cysteine desulfurase family protein	-
J9312_RS13810 (J9312_13710)	cymR	2551805..2552221 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
J9312_RS13815 (J9312_13715)	rarA	2552424..2553689 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
J9312_RS13820 (J9312_13720)	tcdA	2553729..2554493 (-)	765	WP_046160684.1	ThiF family adenylyltransferase	-
J9312_RS13830 (J9312_13730)	aspS	2554828..2556606 (-)	1779	WP_015714438.1	aspartate--tRNA ligase	-
J9312_RS13835 (J9312_13735)	hisS	2556620..2557891 (-)	1272	WP_264379327.1	histidine--tRNA ligase	-
J9312_RS13840 (J9312_13740)	yrzK	2558273..2558443 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=485495 J9312_RS13815 WP_014480427.1 2552424..2553689(+) (rarA) [Bacillus subtilis strain XP]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=485495 J9312_RS13815 WP_014480427.1 2552424..2553689(+) (rarA) [Bacillus subtilis strain XP]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993