Detailed information NTG0484859

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: J7U34_RS09705
• Genome accession: NZ_CP072778
• Coordinates: 1862127..1863395 (-)
• Length: 422 a.a.
• NCBI ID: WP_138496457.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S24748
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1857127..1868395

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7U34_RS09675 (J7U34_09640)	-	1857388..1858215 (+)	828	WP_232085691.1	radical SAM protein	-
J7U34_RS09680 (J7U34_09645)	-	1858208..1859749 (+)	1542	WP_014622049.1	ABC transporter ATP-binding protein	-
J7U34_RS09685 (J7U34_09650)	-	1860153..1860665 (-)	513	WP_014608793.1	helix-turn-helix domain-containing protein	-
J7U34_RS09690 (J7U34_09655)	-	1860981..1861685 (+)	705	Protein_1854	site-specific integrase	-
J7U34_RS09705 (J7U34_09670)	rarA	1862127..1863395 (-)	1269	WP_138496457.1	replication-associated recombination protein A	Machinery gene
J7U34_RS09710 (J7U34_09675)	rpmB	1863565..1863753 (+)	189	WP_084826191.1	50S ribosomal protein L28	-
J7U34_RS09715 (J7U34_09680)	-	1863880..1864146 (+)	267	WP_002952186.1	IreB family regulatory phosphoprotein	-
J7U34_RS09720 (J7U34_09685)	ruvX	1864146..1864565 (+)	420	WP_011681732.1	Holliday junction resolvase RuvX	-
J7U34_RS09725 (J7U34_09690)	-	1864674..1864979 (+)	306	WP_011681733.1	DUF1292 domain-containing protein	-
J7U34_RS09730 (J7U34_09695)	-	1865192..1866838 (+)	1647	WP_138496459.1	hypothetical protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46448.01 Da
• Isoelectric Point: 7.0888

>NTDB_id=484859 J7U34_RS09705 WP_138496457.1 1862127..1863395(-) (rarA) [Streptococcus thermophilus strain S24748]
MPDNLALRMRPRSISEVIGQKHLVGEGKIIRRMVEANMLSSMILYGPPGIGKTSIASAIAGTTKFAFRTFNATVDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKAKQDFLLPLLENGNIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKEAIL
NVLGDKERGFAFEVHLDDDALDFIATATNGDLRSAYNSLDLAVMSTPASGNGQHHITLDIVEKSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTVIAYEDIGLANPDAQVHTVTALEAAQKIGFPEARILIANVV
IDLALSPKSNSAYKAMDAALAELRKSGNLPIPRHLRDGHYAGSKALGNAQDYKYPHAYPEKWVKQQYLPDKLRGVNYFQP
NETGKYERALGANKERIDKLSR

Nucleotide

• Length: 1269 bp

>NTDB_id=484859 J7U34_RS09705 WP_138496457.1 1862127..1863395(-) (rarA) [Streptococcus thermophilus strain S24748]
ATGCCAGATAATCTTGCCTTACGCATGCGTCCACGTTCAATTTCAGAGGTGATTGGTCAGAAACATTTAGTTGGTGAAGG
TAAAATTATTCGCCGTATGGTAGAGGCGAATATGCTGTCGTCAATGATTCTCTACGGACCTCCAGGAATCGGGAAAACCT
CGATAGCCAGTGCTATTGCAGGAACAACAAAATTTGCTTTTAGAACTTTTAATGCCACTGTCGATAGCAAAAAACGTCTA
CAGGAAATTGCAGAAGAGGCTAAATTTTCAGGTGGTTTAGTTCTACTTCTAGATGAGATCCATCGTTTGGATAAAGCAAA
ACAAGATTTTTTGTTACCATTATTAGAGAACGGAAATATTATCATGATTGGTGCCACAACCGAGAATCCGTTTTTTTCTG
TAACACCAGCCATCCGTAGCCGTGTACAAATATTTGAGTTGGAACCACTCTCTAATGAAGATATCAAGGAAGCTATTTTG
AATGTTCTAGGGGACAAGGAGCGTGGCTTCGCCTTTGAGGTTCACTTAGATGATGATGCTCTAGATTTTATTGCGACAGC
TACTAATGGTGATTTACGATCGGCATATAATTCTTTGGATCTGGCTGTCATGTCGACACCAGCTTCAGGAAATGGTCAGC
ATCATATTACCCTAGACATAGTGGAAAAAAGCTTACAACGCAGTTATATTACTATGGATAAAGACGGTGATGGGCACTAT
GATGTCCTTTCTGCCTTGCAAAAATCTATTCGAGGATCTGATGTTAATGCCAGTCTTCACTATGCGGCACGTTTGGTTGA
GGCAGGGGATTTGCCTAGTCTAGCACGTCGCTTGACTGTGATTGCCTATGAGGATATTGGTTTAGCTAATCCAGATGCAC
AAGTTCACACGGTCACAGCCTTGGAAGCTGCACAGAAAATAGGTTTTCCGGAGGCACGTATTTTGATTGCCAACGTAGTT
ATTGACTTAGCATTATCACCTAAGTCGAATTCGGCTTATAAGGCAATGGATGCTGCCCTGGCGGAACTTAGAAAGTCTGG
GAATTTACCTATTCCGCGTCATCTGAGAGATGGACACTATGCTGGAAGTAAGGCACTGGGTAATGCACAAGATTATAAGT
ATCCACATGCCTATCCTGAAAAGTGGGTTAAGCAACAATACCTTCCAGATAAATTAAGAGGAGTCAATTATTTCCAACCT
AATGAAACTGGGAAATACGAAAGAGCTCTTGGAGCTAATAAAGAACGAATCGATAAGTTATCTAGATAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.427	99.289	0.59