Detailed information NTG0484379

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: J8G07_RS10585
• Genome accession: NZ_CP072612
• Coordinates: 2071550..2072818 (-)
• Length: 422 a.a.
• NCBI ID: WP_029326053.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain G10
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2066550..2077818

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J8G07_RS10560	-	2066751..2066921 (+)	171	WP_087920774.1	YrzK family protein	-
J8G07_RS10565	hisS	2067278..2068552 (+)	1275	WP_032873851.1	histidine--tRNA ligase	-
J8G07_RS10570	aspS	2068567..2070345 (+)	1779	WP_032873853.1	aspartate--tRNA ligase	-
J8G07_RS10580	-	2070671..2071435 (+)	765	WP_032873855.1	tRNA threonylcarbamoyladenosine dehydratase	-
J8G07_RS10585	rarA	2071550..2072818 (-)	1269	WP_029326053.1	replication-associated recombination protein A	Machinery gene
J8G07_RS10590	cymR	2073013..2073429 (+)	417	WP_003152730.1	cysteine metabolism transcriptional regulator CymR	-
J8G07_RS10595	-	2073448..2074587 (+)	1140	WP_032873857.1	cysteine desulfurase family protein	-
J8G07_RS10600	mnmA	2074624..2075739 (+)	1116	WP_012118077.1	tRNA 2-thiouridine(34) synthase MnmA	-
J8G07_RS10605	-	2075827..2076447 (+)	621	WP_087920803.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46646.54 Da
• Isoelectric Point: 8.5446

>NTDB_id=484379 J8G07_RS10585 WP_029326053.1 2071550..2072818(-) (rarA) [Bacillus amyloliquefaciens strain G10]
MKPLAYRMRPANIEDIIGQEHLVKEDKIIGRMVRAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVIHNKKDME
IVVQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALKR
ALTDEHRGLGSYSVSVDDDAMDHFAQGCGGDVRSALNALELAVLSTKESSDGTVRITRETAEECLQKKSYTHDKNGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESISRRLLVIAYEDIGLASPQAGPRVLSAIQTAERIGFPEARIPLANAV
IELCLSPKSNSAISAVDEALKDIRTGKIGDVPKHLKDAHYKGAQELGRGIGYQYPHDFENGWVEQQYLPDPLKNKQYYKP
KQTGKFEAAIKQVYEKLMKQKK

Nucleotide

• Length: 1269 bp

>NTDB_id=484379 J8G07_RS10585 WP_029326053.1 2071550..2072818(-) (rarA) [Bacillus amyloliquefaciens strain G10]
ATGAAACCACTGGCGTATCGGATGCGGCCTGCCAATATTGAAGACATTATCGGCCAGGAACATTTGGTCAAAGAAGATAA
AATCATCGGCAGAATGGTGCGTGCAAAGCACTTATCATCCATGATCCTGTACGGACCGCCGGGCATCGGAAAAACATCCA
TCGCCACAGCGATCGCAGGATCGACAAGCATCGCATTCAGGAAATTGAATGCCGTCATTCATAATAAAAAAGACATGGAG
ATTGTCGTACAGGAAGCGAAAATGTCAGGCCAGGTCATTTTAATCCTTGACGAAGTGCACAGGCTTGATAAGGGAAAGCA
GGATTTTCTGCTGCCCTATTTAGAAAACGGCATGATTATTTTAATCGGCGCGACGACCGCCAACCCTTATCATGCCATTA
ACCCGGCCATCAGAAGCCGTACCCAGATATTTGAGCTTGAACCGTTAACACCCGATCTGATCAAGCAGGCATTGAAAAGA
GCGCTCACAGATGAACACCGGGGACTCGGTTCTTACAGCGTTTCGGTGGACGACGACGCGATGGATCATTTCGCACAAGG
GTGCGGGGGAGACGTCCGCTCCGCTTTGAACGCACTGGAGCTTGCCGTGCTCTCCACAAAGGAATCAAGCGACGGCACGG
TCCGGATTACACGGGAAACGGCGGAAGAATGTCTGCAGAAAAAAAGCTATACTCATGATAAAAACGGCGATGCGCATTAT
GACGTCTTATCCGCCTTCCAAAAATCGATCCGAGGCTCGGACGCAAACGCCGCCCTTCATTATCTGGCCCGTCTGATCGA
AGCCGGAGACCTTGAAAGCATATCAAGAAGGCTTCTCGTGATCGCCTATGAAGATATCGGCCTCGCAAGCCCGCAGGCAG
GCCCCCGGGTGCTGAGCGCGATTCAGACCGCAGAACGGATCGGCTTTCCGGAAGCGAGAATTCCGCTGGCCAATGCGGTA
ATCGAATTATGCCTCTCGCCAAAATCAAACTCCGCCATCTCAGCCGTTGATGAGGCGCTCAAAGACATCAGAACGGGTAA
AATCGGCGATGTGCCGAAACATCTAAAAGACGCCCACTATAAAGGGGCCCAAGAGCTCGGACGCGGGATCGGCTATCAAT
ATCCTCACGATTTCGAAAACGGATGGGTCGAACAGCAATATTTGCCCGATCCGTTAAAAAACAAGCAATACTATAAACCG
AAACAAACGGGGAAATTTGAAGCCGCCATAAAGCAAGTGTATGAAAAACTGATGAAGCAGAAAAAATAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	90.736	99.763	0.905