Detailed information NTG0484122

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IC766_RS10085
• Genome accession: NZ_CP061681
• Coordinates: 2144867..2145682 (-)
• Length: 271 a.a.
• NCBI ID: WP_077168510.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain AS9
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2139867..2150682

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC766_RS10055 (IC766_10055)	-	2140180..2140620 (-)	441	WP_107973453.1	SRPBCC family protein	-
IC766_RS10060 (IC766_10060)	tadA	2140690..2141192 (-)	503	Protein_1968	tRNA adenosine(34) deaminase TadA	-
IC766_RS10065 (IC766_10065)	-	2141200..2142324 (-)	1125	WP_151792661.1	enoyl-CoA hydratase/isomerase family protein	-
IC766_RS10070 (IC766_10070)	ung	2142321..2143034 (-)	714	WP_077168513.1	uracil-DNA glycosylase	-
IC766_RS10075 (IC766_10075)	-	2143085..2143681 (-)	597	WP_151792660.1	6-pyruvoyl trahydropterin synthase family protein	-
IC766_RS10080 (IC766_10080)	gspK	2143911..2144867 (-)	957	WP_077168511.1	type II secretion system minor pseudopilin GspK	-
IC766_RS10085 (IC766_10085)	xcpW	2144867..2145682 (-)	816	WP_077168510.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IC766_RS10090 (IC766_10090)	xcpV	2145682..2146062 (-)	381	WP_019458993.1	type II secretion system minor pseudopilin GspI	Machinery gene
IC766_RS10095 (IC766_10095)	-	2146052..2146603 (-)	552	WP_004701984.1	type II secretion system protein	-
IC766_RS10100 (IC766_10100)	-	2146613..2147221 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
IC766_RS10105 (IC766_10105)	-	2147259..2148032 (-)	774	WP_077168509.1	TatD family hydrolase	-
IC766_RS10110 (IC766_10110)	-	2148050..2148391 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
IC766_RS10115 (IC766_10115)	-	2148404..2149384 (-)	981	WP_077168508.1	DNA polymerase III subunit delta'	-
IC766_RS10120 (IC766_10120)	kdsB	2149396..2150157 (-)	762	WP_049064951.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30658.14 Da
• Isoelectric Point: 9.8524

>NTDB_id=484122 IC766_RS10085 WP_077168510.1 2144867..2145682(-) (xcpW) [Acinetobacter seifertii strain AS9]
MIKNKYFHYRSTAAHLAARSGVVSTGYSEHSSSFCAQTKCSFKDPHTRNMVSRLAARSSSVRLTRASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAVHEVHLFELQDAYQQILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDAEQKKLYRLKYTNLNTSNREQPLSSTLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKG
IKIQLTVAGVSYEWIYSLNQGNLALSQQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=484122 IC766_RS10085 WP_077168510.1 2144867..2145682(-) (xcpW) [Acinetobacter seifertii strain AS9]
ATGATAAAAAATAAATATTTTCACTATCGTAGCACAGCTGCGCATCTTGCGGCACGATCAGGAGTTGTGTCGACTGGCTA
TTCAGAGCATAGCTCTTCGTTTTGCGCTCAGACAAAGTGTAGCTTTAAAGACCCTCACACTCGAAACATGGTTTCTCGTC
TTGCGGCGCGATCGAGCAGTGTTCGATTAACTCGCGCCTCAGGATTTACGTTGGTTGAGTTGTTGGTTGCTATAGCTATC
TTTGCGGTTTTATCTTTATTAGGGTGGAAAATTTTCGATTATCTACTCAAGGTTCGTGATCGCAACGCTGTACATGAAGT
GCATTTATTTGAGTTACAAGACGCTTATCAACAAATCCTTCGTGATACTTTGCAAATTATTCCTCTATCGGCAAATCAGG
GTGGACAACTTCATCCAGCTTTAGAAATCGATAATCAAATTTTGCGTTTTAGCAAAGCAGGGGTAACTGATCCTTTAAAA
CAAGGGCTCTCACCGTTTGAACGAATTGAGTATCGTTATGATGCGGAACAAAAAAAACTATATCGTCTTAAATATACCAA
TTTAAATACTTCGAATAGGGAGCAGCCTTTATCGAGTACCTTGTTAAGTCAAGTTGATCAATACCAAATTATGGTTTTGA
CTCCGCAAGAGGTAACAAAATGGCCCGAGGTTAATATTGATCCAACAAAGCCTAACGAGTTAAAAAAATTACCGAAAGGA
ATAAAAATCCAACTTACAGTAGCGGGAGTAAGTTATGAATGGATCTATAGCTTAAATCAAGGCAACTTGGCCCTTTCTCA
GCAAGGTGGTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	94.69	83.395	0.79