Detailed information NTG0484083

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IC767_RS11050
• Genome accession: NZ_CP061678
• Coordinates: 2281387..2282202 (-)
• Length: 271 a.a.
• NCBI ID: WP_077168510.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain AS11
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2276387..2287202

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC767_RS11020 (IC767_11020)	-	2276700..2277140 (-)	441	WP_107973453.1	SRPBCC family protein	-
IC767_RS11025 (IC767_11025)	tadA	2277210..2277712 (-)	503	Protein_2165	tRNA adenosine(34) deaminase TadA	-
IC767_RS11030 (IC767_11030)	-	2277720..2278844 (-)	1125	WP_019458997.1	enoyl-CoA hydratase/isomerase family protein	-
IC767_RS11035 (IC767_11035)	ung	2278841..2279554 (-)	714	WP_077168513.1	uracil-DNA glycosylase	-
IC767_RS11040 (IC767_11040)	-	2279605..2280201 (-)	597	WP_077168512.1	6-pyruvoyl trahydropterin synthase family protein	-
IC767_RS11045 (IC767_11045)	gspK	2280431..2281387 (-)	957	WP_077168511.1	type II secretion system minor pseudopilin GspK	-
IC767_RS11050 (IC767_11050)	xcpW	2281387..2282202 (-)	816	WP_077168510.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IC767_RS11055 (IC767_11055)	xcpV	2282202..2282582 (-)	381	WP_019458993.1	type II secretion system minor pseudopilin GspI	Machinery gene
IC767_RS11060 (IC767_11060)	-	2282572..2283123 (-)	552	WP_004701984.1	type II secretion system protein	-
IC767_RS11065 (IC767_11065)	-	2283133..2283741 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
IC767_RS11070 (IC767_11070)	-	2283779..2284552 (-)	774	WP_077168509.1	TatD family hydrolase	-
IC767_RS11075 (IC767_11075)	-	2284570..2284911 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
IC767_RS11080 (IC767_11080)	-	2284924..2285904 (-)	981	WP_077168508.1	DNA polymerase III subunit delta'	-
IC767_RS11085 (IC767_11085)	kdsB	2285916..2286677 (-)	762	WP_049064951.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30658.14 Da
• Isoelectric Point: 9.8524

>NTDB_id=484083 IC767_RS11050 WP_077168510.1 2281387..2282202(-) (xcpW) [Acinetobacter seifertii strain AS11]
MIKNKYFHYRSTAAHLAARSGVVSTGYSEHSSSFCAQTKCSFKDPHTRNMVSRLAARSSSVRLTRASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAVHEVHLFELQDAYQQILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDAEQKKLYRLKYTNLNTSNREQPLSSTLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKG
IKIQLTVAGVSYEWIYSLNQGNLALSQQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=484083 IC767_RS11050 WP_077168510.1 2281387..2282202(-) (xcpW) [Acinetobacter seifertii strain AS11]
ATGATAAAAAATAAATATTTTCACTATCGTAGCACAGCTGCGCATCTTGCGGCACGATCAGGAGTTGTGTCGACTGGCTA
TTCAGAGCATAGCTCTTCGTTTTGCGCTCAGACAAAGTGTAGCTTTAAAGACCCTCACACTCGAAACATGGTTTCTCGTC
TTGCGGCGCGATCGAGCAGTGTTCGATTAACTCGCGCCTCAGGATTTACGTTGGTTGAGTTGTTGGTTGCTATAGCTATC
TTTGCGGTTTTATCTTTATTAGGGTGGAAAATTTTCGATTATCTACTCAAGGTTCGTGATCGCAACGCTGTACATGAAGT
GCATTTATTTGAGTTACAAGACGCTTATCAACAAATCCTTCGTGATACTTTGCAAATTATTCCTCTATCGGCAAATCAGG
GTGGACAACTTCATCCAGCTTTAGAAATCGATAATCAAATTTTGCGTTTTAGCAAAGCAGGGGTAACTGATCCTTTAAAA
CAAGGGCTCTCACCGTTTGAACGAATTGAGTATCGTTATGATGCGGAACAAAAAAAACTATATCGTCTTAAATATACCAA
TTTAAATACTTCGAATAGGGAGCAGCCTTTATCGAGTACCTTGTTAAGTCAAGTTGATCAATACCAAATTATGGTTTTGA
CTCCGCAAGAGGTAACAAAATGGCCCGAGGTTAATATTGATCCAACAAAGCCTAACGAGTTAAAAAAATTACCGAAAGGA
ATAAAAATCCAACTTACAGTAGCGGGAGTAAGTTATGAATGGATCTATAGCTTAAATCAAGGCAACTTGGCCCTTTCTCA
GCAAGGTGGTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	94.69	83.395	0.79