Detailed information NTG0484043

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IC768_RS11210
• Genome accession: NZ_CP061675
• Coordinates: 2311420..2312235 (-)
• Length: 271 a.a.
• NCBI ID: WP_077168510.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain AS17
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2306420..2317235

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC768_RS11180 (IC768_11180)	-	2306733..2307173 (-)	441	WP_107973453.1	SRPBCC family protein	-
IC768_RS11185 (IC768_11185)	tadA	2307243..2307745 (-)	503	Protein_2194	tRNA adenosine(34) deaminase TadA	-
IC768_RS11190 (IC768_11190)	-	2307753..2308877 (-)	1125	WP_019458997.1	enoyl-CoA hydratase/isomerase family protein	-
IC768_RS11195 (IC768_11195)	ung	2308874..2309587 (-)	714	WP_077168513.1	uracil-DNA glycosylase	-
IC768_RS11200 (IC768_11200)	-	2309638..2310234 (-)	597	WP_077168512.1	6-pyruvoyl trahydropterin synthase family protein	-
IC768_RS11205 (IC768_11205)	gspK	2310464..2311420 (-)	957	WP_077168511.1	type II secretion system minor pseudopilin GspK	-
IC768_RS11210 (IC768_11210)	xcpW	2311420..2312235 (-)	816	WP_077168510.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IC768_RS11215 (IC768_11215)	xcpV	2312235..2312615 (-)	381	WP_019458993.1	type II secretion system minor pseudopilin GspI	Machinery gene
IC768_RS11220 (IC768_11220)	-	2312605..2313156 (-)	552	WP_004701984.1	type II secretion system protein	-
IC768_RS11225 (IC768_11225)	-	2313166..2313774 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
IC768_RS11230 (IC768_11230)	-	2313812..2314585 (-)	774	WP_077168509.1	TatD family hydrolase	-
IC768_RS11235 (IC768_11235)	-	2314603..2314944 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
IC768_RS11240 (IC768_11240)	-	2314957..2315937 (-)	981	WP_077168508.1	DNA polymerase III subunit delta'	-
IC768_RS11245 (IC768_11245)	kdsB	2315949..2316710 (-)	762	WP_049064951.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30658.14 Da
• Isoelectric Point: 9.8524

>NTDB_id=484043 IC768_RS11210 WP_077168510.1 2311420..2312235(-) (xcpW) [Acinetobacter seifertii strain AS17]
MIKNKYFHYRSTAAHLAARSGVVSTGYSEHSSSFCAQTKCSFKDPHTRNMVSRLAARSSSVRLTRASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAVHEVHLFELQDAYQQILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDAEQKKLYRLKYTNLNTSNREQPLSSTLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKG
IKIQLTVAGVSYEWIYSLNQGNLALSQQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=484043 IC768_RS11210 WP_077168510.1 2311420..2312235(-) (xcpW) [Acinetobacter seifertii strain AS17]
ATGATAAAAAATAAATATTTTCACTATCGTAGCACAGCTGCGCATCTTGCGGCACGATCAGGAGTTGTGTCGACTGGCTA
TTCAGAGCATAGCTCTTCGTTTTGCGCTCAGACAAAGTGTAGCTTTAAAGACCCTCACACTCGAAACATGGTTTCTCGTC
TTGCGGCGCGATCGAGCAGTGTTCGATTAACTCGCGCCTCAGGATTTACGTTGGTTGAGTTGTTGGTTGCTATAGCTATC
TTTGCGGTTTTATCTTTATTAGGGTGGAAAATTTTCGATTATCTACTCAAGGTTCGTGATCGCAACGCTGTACATGAAGT
GCATTTATTTGAGTTACAAGACGCTTATCAACAAATCCTTCGTGATACTTTGCAAATTATTCCTCTATCGGCAAATCAGG
GTGGACAACTTCATCCAGCTTTAGAAATCGATAATCAAATTTTGCGTTTTAGCAAAGCAGGGGTAACTGATCCTTTAAAA
CAAGGGCTCTCACCGTTTGAACGAATTGAGTATCGTTATGATGCGGAACAAAAAAAACTATATCGTCTTAAATATACCAA
TTTAAATACTTCGAATAGGGAGCAGCCTTTATCGAGTACCTTGTTAAGTCAAGTTGATCAATACCAAATTATGGTTTTGA
CTCCGCAAGAGGTAACAAAATGGCCCGAGGTTAATATTGATCCAACAAAGCCTAACGAGTTAAAAAAATTACCGAAAGGA
ATAAAAATCCAACTTACAGTAGCGGGAGTAAGTTATGAATGGATCTATAGCTTAAATCAAGGCAACTTGGCCCTTTCTCA
GCAAGGTGGTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	94.69	83.395	0.79