Detailed information NTG0483856

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: J7W01_RS13735
• Genome accession: NZ_CP072525
• Coordinates: 2663531..2664796 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain YB-04
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2658531..2669796

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7W01_RS13715 (J7W01_13715)	yrrB	2659902..2660522 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
J7W01_RS13720 (J7W01_13720)	mnmA	2660608..2661723 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
J7W01_RS13725 (J7W01_13725)	iscSA	2661754..2662893 (-)	1140	WP_041850172.1	cysteine desulfurase family protein	-
J7W01_RS13730 (J7W01_13730)	cymR	2662912..2663328 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
J7W01_RS13735 (J7W01_13735)	rarA	2663531..2664796 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
J7W01_RS13740 (J7W01_13740)	tcdA	2664836..2665600 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
J7W01_RS13750 (J7W01_13750)	aspS	2665935..2667713 (-)	1779	WP_015714438.1	aspartate--tRNA ligase	-
J7W01_RS13755 (J7W01_13755)	hisS	2667727..2669001 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
J7W01_RS13760 (J7W01_13760)	yrzK	2669383..2669553 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=483856 J7W01_RS13735 WP_014480427.1 2663531..2664796(+) (rarA) [Bacillus subtilis strain YB-04]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=483856 J7W01_RS13735 WP_014480427.1 2663531..2664796(+) (rarA) [Bacillus subtilis strain YB-04]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993