Detailed information NTG0483735

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IC778_RS08660
• Genome accession: NZ_CP061634
• Coordinates: 1809787..1810602 (+)
• Length: 271 a.a.
• NCBI ID: WP_077168510.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain AS41
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1804787..1815602

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC778_RS08625 (IC778_08620)	kdsB	1805312..1806073 (+)	762	WP_049064951.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
IC778_RS08630 (IC778_08625)	-	1806085..1807065 (+)	981	WP_077168508.1	DNA polymerase III subunit delta'	-
IC778_RS08635 (IC778_08630)	-	1807078..1807419 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
IC778_RS08640 (IC778_08635)	-	1807437..1808210 (+)	774	WP_077168509.1	TatD family hydrolase	-
IC778_RS08645 (IC778_08640)	-	1808248..1808856 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
IC778_RS08650 (IC778_08645)	-	1808866..1809417 (+)	552	WP_004701984.1	type II secretion system protein	-
IC778_RS08655 (IC778_08650)	xcpV	1809407..1809787 (+)	381	WP_019458993.1	type II secretion system minor pseudopilin GspI	Machinery gene
IC778_RS08660 (IC778_08655)	xcpW	1809787..1810602 (+)	816	WP_077168510.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IC778_RS08665 (IC778_08660)	gspK	1810602..1811558 (+)	957	WP_077168511.1	type II secretion system minor pseudopilin GspK	-
IC778_RS08670 (IC778_08665)	-	1811788..1812384 (+)	597	WP_077168512.1	6-pyruvoyl trahydropterin synthase family protein	-
IC778_RS08675 (IC778_08670)	ung	1812435..1813148 (+)	714	WP_077168513.1	uracil-DNA glycosylase	-
IC778_RS08680 (IC778_08675)	-	1813145..1814269 (+)	1125	WP_019458997.1	enoyl-CoA hydratase/isomerase family protein	-
IC778_RS08685 (IC778_08680)	tadA	1814277..1814780 (+)	504	WP_031944487.1	tRNA adenosine(34) deaminase TadA	-
IC778_RS08690 (IC778_08685)	-	1814850..1815290 (+)	441	WP_107973453.1	SRPBCC family protein	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30658.14 Da
• Isoelectric Point: 9.8524

>NTDB_id=483735 IC778_RS08660 WP_077168510.1 1809787..1810602(+) (xcpW) [Acinetobacter seifertii strain AS41]
MIKNKYFHYRSTAAHLAARSGVVSTGYSEHSSSFCAQTKCSFKDPHTRNMVSRLAARSSSVRLTRASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAVHEVHLFELQDAYQQILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDAEQKKLYRLKYTNLNTSNREQPLSSTLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKG
IKIQLTVAGVSYEWIYSLNQGNLALSQQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=483735 IC778_RS08660 WP_077168510.1 1809787..1810602(+) (xcpW) [Acinetobacter seifertii strain AS41]
ATGATAAAAAATAAATATTTTCACTATCGTAGCACAGCTGCGCATCTTGCGGCACGATCAGGAGTTGTGTCGACTGGCTA
TTCAGAGCATAGCTCTTCGTTTTGCGCTCAGACAAAGTGTAGCTTTAAAGACCCTCACACTCGAAACATGGTTTCTCGTC
TTGCGGCGCGATCGAGCAGTGTTCGATTAACTCGCGCCTCAGGATTTACGTTGGTTGAGTTGTTGGTTGCTATAGCTATC
TTTGCGGTTTTATCTTTATTAGGGTGGAAAATTTTCGATTATCTACTCAAGGTTCGTGATCGCAACGCTGTACATGAAGT
GCATTTATTTGAGTTACAAGACGCTTATCAACAAATCCTTCGTGATACTTTGCAAATTATTCCTCTATCGGCAAATCAGG
GTGGACAACTTCATCCAGCTTTAGAAATCGATAATCAAATTTTGCGTTTTAGCAAAGCAGGGGTAACTGATCCTTTAAAA
CAAGGGCTCTCACCGTTTGAACGAATTGAGTATCGTTATGATGCGGAACAAAAAAAACTATATCGTCTTAAATATACCAA
TTTAAATACTTCGAATAGGGAGCAGCCTTTATCGAGTACCTTGTTAAGTCAAGTTGATCAATACCAAATTATGGTTTTGA
CTCCGCAAGAGGTAACAAAATGGCCCGAGGTTAATATTGATCCAACAAAGCCTAACGAGTTAAAAAAATTACCGAAAGGA
ATAAAAATCCAACTTACAGTAGCGGGAGTAAGTTATGAATGGATCTATAGCTTAAATCAAGGCAACTTGGCCCTTTCTCA
GCAAGGTGGTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	94.69	83.395	0.79