Detailed information NTG0483547

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: J7T63_RS09450
• Genome accession: NZ_CP072442
• Coordinates: 1800634..1801902 (-)
• Length: 422 a.a.
• NCBI ID: WP_372429459.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S24726
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1795634..1806902

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7T63_RS09425 (J7T63_09380)	-	1796713..1798254 (+)	1542	WP_372429457.1	ATP-binding cassette domain-containing protein	-
J7T63_RS09430 (J7T63_09385)	-	1798658..1799170 (-)	513	WP_014608793.1	helix-turn-helix domain-containing protein	-
J7T63_RS09435 (J7T63_09390)	-	1799486..1800190 (+)	705	Protein_1802	site-specific integrase	-
J7T63_RS09450 (J7T63_09405)	rarA	1800634..1801902 (-)	1269	WP_372429459.1	replication-associated recombination protein A	Machinery gene
J7T63_RS09455 (J7T63_09410)	rpmB	1802072..1802260 (+)	189	WP_084826191.1	50S ribosomal protein L28	-
J7T63_RS09460 (J7T63_09415)	-	1802387..1802653 (+)	267	WP_002952186.1	IreB family regulatory phosphoprotein	-
J7T63_RS09465 (J7T63_09420)	ruvX	1802653..1803072 (+)	420	WP_011681732.1	Holliday junction resolvase RuvX	-
J7T63_RS09470 (J7T63_09425)	-	1803181..1803486 (+)	306	WP_011681733.1	DUF1292 domain-containing protein	-
J7T63_RS09475 (J7T63_09430)	-	1803699..1805345 (+)	1647	WP_116920378.1	hypothetical protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46433.94 Da
• Isoelectric Point: 6.8978

>NTDB_id=483547 J7T63_RS09450 WP_372429459.1 1800634..1801902(-) (rarA) [Streptococcus thermophilus strain S24726]
MPDNLALRMRPRSISEVIGQKHLVGEGKIIRRMVEANMLSSMILYGPPGIGKTSIASAIAGTTKFAFRTFNATVDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKAKQDFLLPLLENGNIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKEAIL
NVLGDKERGFAFEVHLDDDALDFIATATNGDLRSAYNSLDLAVMSTPASGNGQHHITLDIVENSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTVIAYEDIGLANPDAQVHTVTALEAAQKIGFPEARILIANVV
IDLALSPKSNSAYKAMDAALAELRKSGNLPIPRHLRDGHYAGSKALGNAQDYKYPHAYPEKWVKQQYLPDKLRGVNYFQP
NETGKYERALGANKERIDKLSR

Nucleotide

• Length: 1269 bp

>NTDB_id=483547 J7T63_RS09450 WP_372429459.1 1800634..1801902(-) (rarA) [Streptococcus thermophilus strain S24726]
ATGCCAGATAATCTTGCCTTACGCATGCGTCCACGTTCAATTTCAGAGGTGATTGGTCAGAAACATTTAGTTGGTGAAGG
TAAAATTATTCGCCGTATGGTAGAGGCGAATATGCTGTCGTCAATGATTCTCTACGGACCTCCAGGAATCGGGAAAACCT
CGATAGCCAGTGCTATTGCAGGAACAACAAAATTTGCTTTTAGAACTTTTAATGCCACTGTCGATAGCAAAAAACGTCTA
CAGGAAATTGCAGAAGAGGCTAAATTTTCAGGTGGTTTAGTTCTACTTCTAGATGAGATCCATCGTTTGGATAAAGCAAA
ACAAGATTTTTTGTTACCATTATTAGAGAACGGAAATATTATCATGATTGGTGCCACAACCGAGAATCCGTTTTTTTCTG
TAACACCAGCCATCCGTAGCCGTGTACAAATATTTGAGTTGGAACCACTCTCTAATGAAGATATCAAGGAAGCTATTTTG
AATGTTCTAGGGGACAAGGAGCGTGGCTTCGCCTTTGAGGTTCACTTAGATGATGATGCTCTAGATTTTATTGCGACAGC
TACTAATGGTGATTTACGATCGGCATATAATTCTTTGGATCTGGCTGTCATGTCGACACCAGCTTCAGGAAATGGTCAGC
ATCATATTACCCTAGACATAGTGGAAAATAGCTTACAACGCAGTTATATTACTATGGATAAAGACGGTGATGGGCACTAT
GATGTCCTTTCTGCCTTGCAAAAATCTATTCGAGGATCTGATGTTAATGCCAGTCTTCACTATGCGGCACGTTTGGTTGA
GGCAGGGGATTTGCCTAGTCTAGCACGTCGCTTGACTGTGATTGCCTATGAGGATATTGGTTTAGCTAATCCAGATGCAC
AAGTTCACACGGTCACAGCCTTGGAAGCTGCACAGAAAATAGGTTTTCCGGAGGCACGTATTTTGATTGCCAACGTAGTT
ATTGACTTAGCATTATCACCTAAGTCGAATTCGGCTTATAAGGCAATGGATGCTGCCCTGGCGGAACTTAGAAAGTCTGG
GAATTTACCTATTCCGCGTCATCTGAGAGATGGACACTATGCTGGAAGTAAGGCACTGGGTAATGCACAAGATTATAAGT
ATCCACATGCCTATCCTGAAAAGTGGGTTAAGCAACAATACCTTCCAGATAAATTAAGAGGAGTCAATTATTTCCAACCT
AATGAAACTGGGAAATACGAAAGAGCTCTTGGAGCTAATAAAGAACGAATCGATAAGTTATCTAGATAA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.427	99.289	0.59